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js4906-25-2-S21_Prophage_curated_prodigal-single.1__X__X__00183
Bact-Virjs4906-25-2-S21_Prophage_curated_prodigal-single.1__X__X__00183
Identity
- Kingdom:
- phage
Quality
86.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-64_122-160
Domain cluster:
representative
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ymsC00 | 2.40.10.480 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.59 | 37.0 | 4.19e-01 | 73.3% | 84.0% |
| 1kb0A01 | 2.140.10.10 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Quinoprotein alcohol dehydrogenase-like superfamily | 0.57 | 45.0 | 2.82e-01 | 84.2% | 32.2% |
| 4py5A01 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.57 | 32.0 | 3.73e-01 | 91.1% | 76.4% |
| 3dueA00 | 3.40.1420.30 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › | 0.57 | 43.0 | 3.99e-01 | 79.2% | 79.5% |
| 3lxqA01 | 3.30.1120.80 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.57 | 39.0 | 3.93e-01 | 83.2% | 70.7% |
| 1q7fB00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.56 | 50.0 | 3.62e-01 | 97.0% | 88.7% |
| 5tz6B02 | 3.10.129.120 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › | 0.55 | 42.0 | 3.64e-01 | 80.2% | 86.4% |
| 1tltA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.55 | 45.0 | 3.68e-01 | 88.1% | 58.1% |
| 3uuwB02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.55 | 45.0 | 3.70e-01 | 88.1% | 58.7% |
| 4hbrA00 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 47.0 | 4.22e-01 | 93.1% | 83.6% |
| 4rbnA01 | 3.10.450.330 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 41.0 | 3.81e-01 | 79.2% | 69.0% |
| 2d0bA01 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.55 | 30.0 | 3.17e-01 | 89.1% | 59.6% |
| 1xeaA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.54 | 44.0 | 3.61e-01 | 88.1% | 54.2% |
| 3s27B01 | 3.10.450.330 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 40.0 | 3.67e-01 | 78.2% | 67.7% |
| 4fr9A00 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 45.0 | 4.05e-01 | 90.1% | 82.3% |
| 5tf2A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 45.0 | 3.15e-01 | 93.1% | 96.7% |
| 2a9sB00 | 3.90.950.20 | Alpha Beta › Alpha-Beta Complex › Maf protein › CinA-like | 0.53 | 45.0 | 3.88e-01 | 96.0% | 80.0% |
| 4g56D00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 45.0 | 3.22e-01 | 93.1% | 97.7% |
| 1nvpD02 | 2.30.18.10 | Mainly Beta › Roll › TATA box binding Protein, subunit D; domain 2 › Transcription factor IIA (TFIIA), beta-barrel domain | 0.53 | 25.0 | 3.37e-01 | 70.3% | 93.5% |
| 4u1eI00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 46.0 | 3.23e-01 | 96.0% | 90.3% |
| 4ntqA00 | 3.10.380.20 | Alpha Beta › Roll › Ribonuclease domain of colicin e3 (Residues 456-551) › Novel toxin 21 (CdiA), C-terminal domain | 0.52 | 35.0 | 3.92e-01 | 93.1% | 90.8% |
| 2xzmR01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 47.0 | 3.30e-01 | 100.0% | 67.0% |
| 4gq1A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 46.0 | 3.19e-01 | 97.0% | 81.6% |
| 4dsdA00 | 3.40.1420.30 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › | 0.52 | 39.0 | 3.68e-01 | 80.2% | 93.7% |
| 3brcA02 | 3.40.50.10150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › B12-dependent dehydatase associated subunit | 0.52 | 44.0 | 4.22e-01 | 96.0% | 90.8% |
| 3ei3B02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 47.0 | 3.31e-01 | 100.0% | 46.2% |
| 4g59B00 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.52 | 42.0 | 3.65e-01 | 90.1% | 55.2% |
| 5ov3B01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 46.0 | 3.26e-01 | 97.0% | 66.0% |
| 4r7rA00 | 3.30.1490.410 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Uncharacterised protein PF16224, DUF4883 | 0.52 | 37.0 | 3.55e-01 | 75.2% | 80.3% |
| 3jb9L00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 47.0 | 3.34e-01 | 100.0% | 63.1% |
| 4aezA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 44.0 | 3.19e-01 | 99.0% | 88.3% |
| 3htyA00 | 2.40.128.280 | Mainly Beta › Beta Barrel › Lipocalin › | 0.51 | 38.0 | 3.99e-01 | 92.1% | 88.3% |
| 3w15A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 46.0 | 3.20e-01 | 100.0% | 75.4% |
| 4zovB00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 46.0 | 3.11e-01 | 100.0% | 57.9% |
| 5upiA01 | 2.70.98.30 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 | 0.51 | 37.0 | 3.16e-01 | 80.2% | 96.8% |
| 6az1g01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.50 | 44.0 | 3.22e-01 | 100.0% | 53.9% |
| 7apkF01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.50 | 45.0 | 3.16e-01 | 100.0% | 72.3% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3390746 | 5.1.3.19 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Hira | 0.60 | 45.0 | 3.69e-01 | 79.2% | 97.8% |
| 4946049 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.60 | 40.0 | 4.36e-01 | 89.1% | 85.0% |
| 4325844 | 5085.1.1.2 ↗ | a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › PF27489, PF29296 | 0.60 | 46.0 | 3.02e-01 | 82.2% | 65.8% |
| 3237574 | 5.1.4.164 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_VPS8 | 0.57 | 43.0 | 2.88e-01 | 79.2% | 24.8% |
| 3270645 | 5.1.3.25 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Mcl1_mid | 0.56 | 50.0 | 3.48e-01 | 99.0% | 54.5% |
| 3185244 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.55 | 42.0 | 2.71e-01 | 78.2% | 24.6% |
| 3376744 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 47.0 | 2.80e-01 | 93.1% | 47.7% |
| None | — | 0.55 | 38.0 | 2.84e-01 | 72.3% | 47.9% | |
| 4168943 | 5.1.4.275 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, ANAPC4_WD40, Beta-prop_NOL10_N | 0.55 | 41.0 | 2.72e-01 | 78.2% | 27.1% |
| 3975292 | 7515.1.1.2 ↗ | a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like › Sulfatase | 0.55 | 41.0 | 2.82e-01 | 79.2% | 75.3% |
| 3992272 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 49.0 | 3.57e-01 | 97.0% | 72.5% |
| 4940077 | 5.1.5.11 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PQQ_2 | 0.55 | 45.0 | 3.09e-01 | 91.1% | 57.6% |
| 4028603 | 5.1.4.402 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF30552 | 0.55 | 48.0 | 3.15e-01 | 96.0% | 87.7% |
| 3779783 | 5.1.4.325 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, PF30552 | 0.54 | 48.0 | 3.20e-01 | 97.0% | 89.9% |
| 3642871 | 5.1.4.336 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IP5PC_F | 0.54 | 48.0 | 3.07e-01 | 96.0% | 84.3% |
| 5001001 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 48.0 | 3.44e-01 | 97.0% | 96.2% |
| 3340525 | 5.1.5.116 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_IP5PC_F | 0.54 | 47.0 | 3.19e-01 | 96.0% | 96.1% |
| 3272681 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.54 | 46.0 | 3.23e-01 | 93.1% | 81.2% |
| 3632947 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.54 | 48.0 | 3.27e-01 | 97.0% | 84.2% |
| 3275802 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.54 | 46.0 | 2.98e-01 | 93.1% | 88.3% |
| 3888391 | 5.1.4.325 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, PF30552 | 0.54 | 48.0 | 3.33e-01 | 99.0% | 92.9% |
| 3169639 | 5.1.4.179 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_Vps41 | 0.53 | 48.0 | 3.22e-01 | 100.0% | 54.4% |
| 3699699 | 5.1.4.179 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_Vps41 | 0.53 | 47.0 | 3.66e-01 | 98.0% | 88.9% |
| 3722546 | 5.1.4.379 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, WD40_2 | 0.53 | 47.0 | 3.18e-01 | 97.0% | 81.6% |
| 3634517 | 5.1.3.116 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_KLHDC2_KLHL20_DRC7 | 0.53 | 45.0 | 3.01e-01 | 97.0% | 84.9% |
| 3921144 | 5.1.4.179 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_Vps41 | 0.53 | 47.0 | 3.28e-01 | 100.0% | 57.9% |
| 3507972 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.52 | 47.0 | 3.26e-01 | 100.0% | 63.5% |
| 3237235 | 5.1.4.139 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_2 | 0.52 | 47.0 | 3.27e-01 | 100.0% | 95.8% |
| 4214195 | 5.1.3.19 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Hira | 0.52 | 46.0 | 3.68e-01 | 100.0% | 81.4% |
| 3821923 | 5.1.4.334 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_IFT140_1st | 0.52 | 45.0 | 3.08e-01 | 96.0% | 75.9% |
| None | — | 0.52 | 47.0 | 3.18e-01 | 100.0% | 54.0% | |
| 4141086 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.51 | 46.0 | 3.03e-01 | 100.0% | 41.0% |
| 3580811 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.51 | 46.0 | 3.50e-01 | 100.0% | 75.0% |
| None | — | 0.51 | 45.0 | 2.73e-01 | 100.0% | 29.3% | |
| 4526745 | 5.1.4.40 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 | 0.51 | 46.0 | 3.14e-01 | 100.0% | 52.5% |
| 3245227 | 5.1.4.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 | 0.51 | 46.0 | 3.25e-01 | 100.0% | 54.0% |
| 3216286 | 5.1.3.164 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_Rol-3 | 0.51 | 44.0 | 3.40e-01 | 94.1% | 74.5% |
| 3926119 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.51 | 46.0 | 3.24e-01 | 100.0% | 67.8% |
| 3388090 | 5.1.11.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed | 0.51 | 45.0 | 3.22e-01 | 100.0% | 40.0% |
| None | — | 0.51 | 46.0 | 3.03e-01 | 100.0% | 48.2% | |
| 3840061 | 4991.1.1.0 ↗ | extended segments › Lag-3 N-terminal region › Lag-3 N-terminal region › Lag-3 N-terminal region | 0.51 | 45.0 | 3.03e-01 | 97.0% | 73.4% |
| 4466468 | 7026.1.1.5 ↗ | beta meanders › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › ATG2_CAD | 0.50 | 44.0 | 3.54e-01 | 100.0% | 94.8% |
| 3255756 | 5.1.4.254 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_NOL10_N | 0.50 | 45.0 | 2.96e-01 | 100.0% | 66.1% |
D2
high
residues 68-121
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vq8P01 | 1.10.1650.10 | Mainly Alpha › Orthogonal Bundle › 50s Ribosomal Protein L19e, Chain O, domain 1 › | 0.65 | 43.0 | 4.28e-01 | 96.3% | 67.3% |
| 4a17O01 | 1.10.1650.10 | Mainly Alpha › Orthogonal Bundle › 50s Ribosomal Protein L19e, Chain O, domain 1 › | 0.63 | 42.0 | 4.22e-01 | 96.3% | 67.3% |
| 2nnwA01 | 3.30.420.220 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.63 | 52.0 | 4.10e-01 | 96.3% | 83.6% |
| 6j9eJ00 | 3.30.160.560 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.61 | 43.0 | 4.08e-01 | 75.9% | 69.7% |
| 2bh8A02 | 6.20.370.20 | Special › Other non-globular › Rhinovirus 14, subunit 4 › | 0.61 | 29.0 | 3.61e-01 | 100.0% | 62.5% |
| 3fedA02 | 3.50.30.30 | Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › | 0.58 | 48.0 | 3.25e-01 | 96.3% | 97.7% |
| 2levA00 | 4.10.430.10 | Few Secondary Structures › Irregular › H-NS DNA Binding Protein › Histone-like protein H-NS, C-terminal domain | 0.57 | 38.0 | 3.80e-01 | 96.3% | 66.7% |
| 2v3sA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.56 | 44.0 | 3.87e-01 | 96.3% | 97.9% |
| 3eipA00 | 3.10.50.20 | Alpha Beta › Roll › Chitinase A; domain 3 › Cloacin immunity protein | 0.56 | 48.0 | 4.16e-01 | 96.3% | 88.1% |
| 2ap1A01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.56 | 42.0 | 3.31e-01 | 88.9% | 87.8% |
| 5icuA00 | 2.60.40.1220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 44.0 | 3.58e-01 | 100.0% | 46.1% |
| 2w4lB00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.55 | 48.0 | 3.49e-01 | 100.0% | 45.2% |
| 4bf8A00 | 3.10.50.40 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.54 | 47.0 | 3.72e-01 | 100.0% | 68.4% |
| 1qwkA00 | 3.20.20.100 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain | 0.54 | 41.0 | 2.71e-01 | 94.4% | 93.9% |
| 1p7hL02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 45.0 | 3.64e-01 | 96.3% | 48.6% |
| 6ixwB01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.53 | 39.0 | 2.92e-01 | 85.2% | 94.4% |
| 3rj2X00 | 2.60.120.1150 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 47.0 | 3.49e-01 | 100.0% | 69.9% |
| 2j1vA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 44.0 | 3.32e-01 | 100.0% | 36.2% |
| 1yaxB00 | 3.30.450.140 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PhoQ sensor domain | 0.52 | 39.0 | 3.10e-01 | 87.0% | 88.8% |
| 2kfwA01 | 3.10.50.40 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.52 | 44.0 | 3.58e-01 | 100.0% | 67.3% |
| 2pn5A02 | 2.60.40.1930 | Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain | 0.52 | 45.0 | 3.63e-01 | 98.1% | 51.5% |
| 3rosA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.51 | 40.0 | 2.70e-01 | 92.6% | 75.0% |
| 4oj6C03 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.50 | 38.0 | 2.38e-01 | 90.7% | 36.1% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5036714 | 2492.1.1.16 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › TM1506 | 0.67 | 49.0 | 3.84e-01 | 100.0% | 35.0% |
| 4477814 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.66 | 47.0 | 3.95e-01 | 100.0% | 43.2% |
| 5013411 | 3407.1.1.2 ↗ | mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › Nop5_56-rel_N_Arc | 0.63 | 52.0 | 4.12e-01 | 96.3% | 85.0% |
| 4236893 | 2487.1.1.7 ↗ | a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › PA | 0.63 | 52.0 | 3.51e-01 | 96.3% | 95.2% |
| 3839138 | 2004.1.1.36 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Dynamin_N | 0.62 | 44.0 | 2.87e-01 | 98.1% | 15.8% |
| 3177841 | 221.1.1.52 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ubiquitin_2 | 0.61 | 48.0 | 4.01e-01 | 98.1% | 51.1% |
| 5070545 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.59 | 48.0 | 3.75e-01 | 100.0% | 40.8% |
| 4980287 | 821.1.1.0 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.59 | 43.0 | 3.75e-01 | 98.1% | 50.6% |
| 4932836 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 49.0 | 4.65e-01 | 98.1% | 96.9% |
| 3245221 | 2492.1.1.1 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › dCMP_cyt_deam_1 | 0.57 | 51.0 | 3.73e-01 | 100.0% | 49.7% |
| 3210917 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 42.0 | 3.62e-01 | 96.3% | 50.6% |
| 3233834 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.56 | 45.0 | 3.55e-01 | 100.0% | 40.8% |
| 3967555 | 10.12.1.53 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_3 | 0.56 | 48.0 | 3.21e-01 | 100.0% | 24.8% |
| 4935321 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 49.0 | 4.79e-01 | 100.0% | 98.3% |
| 4250283 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.55 | 47.0 | 3.86e-01 | 98.1% | 74.3% |
| 4956002 | 2484.4.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like | 0.55 | 40.0 | 3.40e-01 | 87.0% | 69.1% |
| 5033423 | 284.1.1.1 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › FKBP_C | 0.53 | 46.0 | 4.01e-01 | 100.0% | 82.4% |
| 3970378 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.52 | 38.0 | 2.87e-01 | 87.0% | 56.5% |
| 3970092 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 44.0 | 4.24e-01 | 100.0% | 100.0% |
| 4947741 | 821.1.1.17 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › PF27096 | 0.52 | 44.0 | 3.78e-01 | 98.1% | 60.0% |
| 3789849 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 43.0 | 4.20e-01 | 98.1% | 85.0% |
| 4111785 | 821.1.1.9 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › PF30054 | 0.51 | 43.0 | 3.66e-01 | 98.1% | 55.8% |
| 4924546 | 325.1.1.9 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › CO dehydrogenase molybdoprotein N-domain-like › CPSase_L_D2 | 0.51 | 28.0 | 2.28e-01 | 100.0% | 21.5% |
| 4187379 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.51 | 37.0 | 2.92e-01 | 77.8% | 94.2% |
| 5046033 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.50 | 42.0 | 3.19e-01 | 100.0% | 38.5% |