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js4906-25-2-S21_Prophage_curated_prodigal-single.1__X__X__00210
Bact-Virjs4906-25-2-S21_Prophage_curated_prodigal-single.1__X__X__00210
Identity
- Kingdom:
- phage
Quality
81.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-69
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1igqB00 | 2.30.30.150 | Mainly Beta › Roll › SH3 type barrels. › KorB, C-terminal domain | 0.79 | 54.0 | 5.67e-01 | 100.0% | 77.2% |
| 2kxcA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.73 | 62.0 | 6.14e-01 | 100.0% | 86.6% |
| 2fhdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 55.0 | 5.59e-01 | 100.0% | 83.9% |
| 2lccA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 57.0 | 5.34e-01 | 100.0% | 71.1% |
| 2f5kA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 52.0 | 5.71e-01 | 100.0% | 100.0% |
| 7r3mA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.68 | 55.0 | 5.11e-01 | 100.0% | 69.5% |
| 4qqgG00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 54.0 | 5.20e-01 | 100.0% | 76.4% |
| 2ke9A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.66 | 58.0 | 5.72e-01 | 100.0% | 91.0% |
| 3askA02 | 2.30.30.1150 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 56.0 | 4.23e-01 | 100.0% | 39.1% |
| 1i1jB00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.65 | 58.0 | 4.88e-01 | 100.0% | 62.5% |
| 2l3rA02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 53.0 | 5.13e-01 | 100.0% | 80.8% |
| 2kgtA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.63 | 54.0 | 5.21e-01 | 100.0% | 83.3% |
| 1wgsA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 47.0 | 3.79e-01 | 100.0% | 40.6% |
| 3nqiA01 | 2.40.50.500 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NigD-like N-terminal OB domain | 0.61 | 44.0 | 4.37e-01 | 76.2% | 98.5% |
| 2qi2A01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.60 | 47.0 | 4.12e-01 | 100.0% | 54.8% |
| 2olgA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.55 | 47.0 | 3.96e-01 | 100.0% | 60.9% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3408330 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.82 | 64.0 | 5.41e-01 | 100.0% | 52.0% |
| 3598283 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 54.0 | 4.28e-01 | 100.0% | 39.2% |
| 3924619 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 56.0 | 4.49e-01 | 100.0% | 44.2% |
| 147797 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.71 | 57.0 | 5.57e-01 | 100.0% | 79.4% |
| 3703932 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 53.0 | 5.45e-01 | 100.0% | 85.0% |
| 3781440 | 4.1.1.51 ↗ | beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor | 0.69 | 56.0 | 5.17e-01 | 100.0% | 70.0% |
| 3484700 | 4.8.1.10 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like | 0.68 | 56.0 | 4.80e-01 | 100.0% | 57.0% |
| 3259841 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 61.0 | 5.89e-01 | 100.0% | 90.0% |
| 3824699 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.67 | 53.0 | 5.24e-01 | 100.0% | 81.5% |
| 3868602 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.66 | 59.0 | 5.06e-01 | 100.0% | 65.0% |
| 3710561 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.66 | 58.0 | 5.75e-01 | 100.0% | 93.8% |
| 4291404 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 57.0 | 5.40e-01 | 100.0% | 88.0% |
| 4932404 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.64 | 53.0 | 4.02e-01 | 100.0% | 37.5% |
| 3450257 | 4.1.1.150 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF3123 | 0.64 | 57.0 | 4.98e-01 | 100.0% | 66.3% |
| 3893892 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.63 | 57.0 | 5.27e-01 | 100.0% | 92.5% |
| 3302166 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.63 | 49.0 | 4.88e-01 | 100.0% | 84.6% |
| 3897512 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.63 | 56.0 | 5.22e-01 | 100.0% | 95.0% |
| 3886721 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 56.0 | 4.97e-01 | 100.0% | 88.9% |
| 3931715 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.63 | 56.0 | 4.79e-01 | 100.0% | 96.0% |
| 4207556 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.62 | 55.0 | 5.35e-01 | 100.0% | 95.7% |
| 3812766 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.62 | 53.0 | 5.17e-01 | 100.0% | 85.7% |
| 3739064 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 49.0 | 4.93e-01 | 100.0% | 89.2% |
| 3510414 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.61 | 52.0 | 4.86e-01 | 95.2% | 77.5% |
| 3572647 | 4.1.1.227 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP_KDM3B | 0.61 | 50.0 | 4.45e-01 | 100.0% | 64.4% |
| 3279083 | 4.6.1.7 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PF26205 | 0.59 | 50.0 | 4.82e-01 | 100.0% | 84.0% |
| 3585016 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.59 | 43.0 | 4.46e-01 | 79.4% | 95.0% |
| 5039871 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.53 | 42.0 | 2.88e-01 | 93.7% | 33.1% |
D2
high
residues 74-196
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1sgoA01 | 3.30.2280.10 | Alpha Beta › 2-Layer Sandwich › copper amine oxidase-like fold › Hypothetical protein (hspc210) | 0.65 | 44.0 | 4.66e-01 | 84.6% | 78.7% |
| 1ygyB03 | 3.30.1330.90 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › D-3-phosphoglycerate dehydrogenase; domain 3 | 0.58 | 43.0 | 4.14e-01 | 76.4% | 93.5% |
| 2il5A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 44.0 | 3.99e-01 | 90.2% | 81.5% |
| 2lf2A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 45.0 | 4.03e-01 | 96.7% | 80.0% |
| 2z4hA01 | 2.40.128.300 | Mainly Beta › Beta Barrel › Lipocalin › NlpE, N-terminal domain | 0.51 | 33.0 | 3.86e-01 | 75.6% | 100.0% |
| 3mazA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.50 | 35.0 | 3.86e-01 | 89.4% | 90.9% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3973778 | 3982.1.1.0 ↗ | a+b complex topology › lantibiotic self-resistance lipoprotein MlbQ › lantibiotic self-resistance lipoprotein MlbQ › lantibiotic self-resistance lipoprotein MlbQ | 0.66 | 40.0 | 4.43e-01 | 78.0% | 75.0% |
| 3291057 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.62 | 36.0 | 4.53e-01 | 84.6% | 100.0% |
| 5059099 | 241.2.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like | 0.62 | 43.0 | 4.86e-01 | 88.6% | 98.9% |
| 3589569 | 243.3.1.13 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF5590 | 0.59 | 29.0 | 4.01e-01 | 83.7% | 96.7% |
| 3988706 | 243.3.1.13 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF5590 | 0.58 | 31.0 | 3.93e-01 | 85.4% | 88.6% |
| 3980136 | 243.3.1.21 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › YsaB | 0.58 | 34.0 | 4.11e-01 | 87.0% | 93.3% |
| 3217981 | 2484.1.1.200 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH | 0.57 | 33.0 | 2.92e-01 | 93.5% | 41.2% |
| 3916012 | 192.29.1.276 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › FmiP_Thoc5 | 0.56 | 44.0 | 3.89e-01 | 83.7% | 93.0% |
| 3713198 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.54 | 39.0 | 3.68e-01 | 78.9% | 61.3% |
| 4032043 | 331.3.1.9 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 | 0.52 | 44.0 | 4.02e-01 | 91.1% | 81.8% |
| 5076776 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.51 | 27.0 | 3.17e-01 | 96.7% | 72.6% |