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js4906-25-2-S21_Prophage_curated_prodigal-single.1__X__X__00222
Bact-Virjs4906-25-2-S21_Prophage_curated_prodigal-single.1__X__X__00222
Identity
- Kingdom:
- phage
Quality
60.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-117
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01624.26 best | MutS_I | 39.7 | 7.30e-10 | 87.0% | 69.0% |
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ewqB01 | 3.40.1170.10 | Alpha Beta › 3-Layer(aba) Sandwich › MutS, DNA mismatch repair protein, domain I › DNA repair protein MutS, domain I | 0.88 | 68.0 | 6.75e-01 | 93.0% | 78.0% |
| 1e3mA01 | 3.40.1170.10 | Alpha Beta › 3-Layer(aba) Sandwich › MutS, DNA mismatch repair protein, domain I › DNA repair protein MutS, domain I | 0.85 | 71.0 | 6.92e-01 | 93.0% | 81.3% |
| 2o8eA01 | 3.40.1170.10 | Alpha Beta › 3-Layer(aba) Sandwich › MutS, DNA mismatch repair protein, domain I › DNA repair protein MutS, domain I | 0.82 | 70.0 | 6.93e-01 | 97.4% | 86.8% |
| 3thxB01 | 3.40.1170.10 | Alpha Beta › 3-Layer(aba) Sandwich › MutS, DNA mismatch repair protein, domain I › DNA repair protein MutS, domain I | 0.81 | 70.0 | 6.63e-01 | 94.8% | 78.6% |
| 2o8bB01 | 3.40.1170.10 | Alpha Beta › 3-Layer(aba) Sandwich › MutS, DNA mismatch repair protein, domain I › DNA repair protein MutS, domain I | 0.77 | 68.0 | 5.86e-01 | 93.0% | 62.9% |
| 1a79A02 | 3.40.1170.20 | Alpha Beta › 3-Layer(aba) Sandwich › MutS, DNA mismatch repair protein, domain I › tRNA intron endonuclease, N-terminal domain | 0.77 | 40.0 | 5.06e-01 | 78.3% | 83.1% |
| 3ttgA00 | 3.30.1360.120 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 | 0.61 | 49.0 | 3.52e-01 | 87.0% | 85.5% |
| 2qsfA04 | 3.30.70.2460 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Rad4, beta-hairpin domain BHD3 | 0.58 | 34.0 | 4.05e-01 | 73.9% | 92.9% |
| 3e54A00 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.58 | 40.0 | 3.60e-01 | 70.4% | 86.2% |
| 3u0oA02 | 3.90.650.10 | Alpha Beta › Alpha-Beta Complex › Phosphoribosyl-aminoimidazole Synthetase; Chain A, domain 2 › PurM-like C-terminal domain | 0.54 | 38.0 | 3.31e-01 | 72.2% | 96.7% |
| 4q05A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 39.0 | 2.91e-01 | 79.1% | 87.8% |
| 1nrkA01 | 3.30.70.1630 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 40.0 | 4.31e-01 | 86.1% | 97.9% |
| 3pnnA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.51 | 44.0 | 3.28e-01 | 94.8% | 88.0% |
| 4ks9B02 | 3.40.630.150 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Malonyl-CoA decarboxylase, catalytic domain | 0.50 | 36.0 | 2.88e-01 | 76.5% | 71.4% |
| 3m84A02 | 3.90.650.10 | Alpha Beta › Alpha-Beta Complex › Phosphoribosyl-aminoimidazole Synthetase; Chain A, domain 2 › PurM-like C-terminal domain | 0.50 | 35.0 | 3.07e-01 | 72.2% | 96.6% |
| 5ijgA01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.50 | 42.0 | 3.46e-01 | 91.3% | 70.4% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4943694 | 242.3.1.3 ↗ | a+b two layers › Homing endonucleases-like › DNA repair protein MutS, domain I › DNA repair protein MutS, domain I › MutS_II | 0.87 | 72.0 | 7.42e-01 | 93.0% | 90.0% |
| 4419828 | 242.3.1.1 ↗ | a+b two layers › Homing endonucleases-like › DNA repair protein MutS, domain I › DNA repair protein MutS, domain I › MutS_I | 0.86 | 71.0 | 7.12e-01 | 93.0% | 86.1% |
| 4969652 | 242.3.1.0 ↗ | a+b two layers › Homing endonucleases-like › DNA repair protein MutS, domain I › DNA repair protein MutS, domain I | 0.86 | 69.0 | 7.20e-01 | 89.6% | 91.4% |
| 4643759 | 242.3.1.1 ↗ | a+b two layers › Homing endonucleases-like › DNA repair protein MutS, domain I › DNA repair protein MutS, domain I › MutS_I | 0.85 | 73.0 | 6.81e-01 | 93.0% | 74.3% |
| 4026490 | 242.3.1.1 ↗ | a+b two layers › Homing endonucleases-like › DNA repair protein MutS, domain I › DNA repair protein MutS, domain I › MutS_I | 0.85 | 67.0 | 6.31e-01 | 95.7% | 69.6% |
| 4165863 | 242.3.1.1 ↗ | a+b two layers › Homing endonucleases-like › DNA repair protein MutS, domain I › DNA repair protein MutS, domain I › MutS_I | 0.84 | 72.0 | 6.74e-01 | 93.0% | 75.6% |
| 4018379 | 242.3.1.1 ↗ | a+b two layers › Homing endonucleases-like › DNA repair protein MutS, domain I › DNA repair protein MutS, domain I › MutS_I | 0.82 | 72.0 | 7.02e-01 | 94.8% | 84.8% |
| 4863769 | 242.3.1.1 ↗ | a+b two layers › Homing endonucleases-like › DNA repair protein MutS, domain I › DNA repair protein MutS, domain I › MutS_I | 0.82 | 70.0 | 6.56e-01 | 94.8% | 75.6% |
| 956550 | 242.3.1.1 ↗ | a+b two layers › Homing endonucleases-like › DNA repair protein MutS, domain I › DNA repair protein MutS, domain I › MutS_I | 0.81 | 67.0 | 7.18e-01 | 87.8% | 100.0% |
| 4179408 | 242.3.1.1 ↗ | a+b two layers › Homing endonucleases-like › DNA repair protein MutS, domain I › DNA repair protein MutS, domain I › MutS_I | 0.81 | 73.0 | 6.81e-01 | 94.8% | 92.9% |
| 3744177 | 242.3.1.1 ↗ | a+b two layers › Homing endonucleases-like › DNA repair protein MutS, domain I › DNA repair protein MutS, domain I › MutS_I | 0.81 | 69.0 | 6.23e-01 | 94.8% | 68.0% |
| 3222945 | 242.3.1.1 ↗ | a+b two layers › Homing endonucleases-like › DNA repair protein MutS, domain I › DNA repair protein MutS, domain I › MutS_I | 0.81 | 69.0 | 6.86e-01 | 100.0% | 86.7% |
| 3470570 | 242.3.1.1 ↗ | a+b two layers › Homing endonucleases-like › DNA repair protein MutS, domain I › DNA repair protein MutS, domain I › MutS_I | 0.81 | 67.0 | 6.80e-01 | 93.9% | 87.8% |
| 4863761 | 242.3.1.1 ↗ | a+b two layers › Homing endonucleases-like › DNA repair protein MutS, domain I › DNA repair protein MutS, domain I › MutS_I | 0.80 | 67.0 | 6.60e-01 | 98.3% | 82.9% |
| 3737487 | 242.3.1.1 ↗ | a+b two layers › Homing endonucleases-like › DNA repair protein MutS, domain I › DNA repair protein MutS, domain I › MutS_I | 0.80 | 67.0 | 6.47e-01 | 97.4% | 80.0% |
| 3443621 | 242.3.1.1 ↗ | a+b two layers › Homing endonucleases-like › DNA repair protein MutS, domain I › DNA repair protein MutS, domain I › MutS_I | 0.80 | 70.0 | 6.11e-01 | 94.8% | 65.0% |
| 3264631 | 242.3.1.1 ↗ | a+b two layers › Homing endonucleases-like › DNA repair protein MutS, domain I › DNA repair protein MutS, domain I › MutS_I | 0.80 | 69.0 | 6.81e-01 | 96.5% | 86.7% |
| 4404464 | 242.3.1.1 ↗ | a+b two layers › Homing endonucleases-like › DNA repair protein MutS, domain I › DNA repair protein MutS, domain I › MutS_I | 0.80 | 67.0 | 6.86e-01 | 94.8% | 90.9% |
| 3789677 | 242.3.1.0 ↗ | a+b two layers › Homing endonucleases-like › DNA repair protein MutS, domain I › DNA repair protein MutS, domain I | 0.80 | 69.0 | 6.13e-01 | 93.0% | 67.1% |
| 3355928 | 242.3.1.0 ↗ | a+b two layers › Homing endonucleases-like › DNA repair protein MutS, domain I › DNA repair protein MutS, domain I | 0.79 | 59.0 | 6.22e-01 | 96.5% | 84.8% |
| 4000154 | 242.3.1.1 ↗ | a+b two layers › Homing endonucleases-like › DNA repair protein MutS, domain I › DNA repair protein MutS, domain I › MutS_I | 0.79 | 64.0 | 6.36e-01 | 94.8% | 81.7% |
| 3311675 | 242.3.1.1 ↗ | a+b two layers › Homing endonucleases-like › DNA repair protein MutS, domain I › DNA repair protein MutS, domain I › MutS_I | 0.79 | 59.0 | 6.06e-01 | 96.5% | 80.9% |
| 3830319 | 242.3.1.1 ↗ | a+b two layers › Homing endonucleases-like › DNA repair protein MutS, domain I › DNA repair protein MutS, domain I › MutS_I | 0.79 | 68.0 | 5.87e-01 | 95.7% | 62.4% |
| 3927361 | 242.3.1.0 ↗ | a+b two layers › Homing endonucleases-like › DNA repair protein MutS, domain I › DNA repair protein MutS, domain I | 0.79 | 65.0 | 6.32e-01 | 97.4% | 80.0% |
| 3698391 | 242.3.1.1 ↗ | a+b two layers › Homing endonucleases-like › DNA repair protein MutS, domain I › DNA repair protein MutS, domain I › MutS_I | 0.79 | 65.0 | 6.37e-01 | 97.4% | 80.8% |
| 3645272 | 242.3.1.1 ↗ | a+b two layers › Homing endonucleases-like › DNA repair protein MutS, domain I › DNA repair protein MutS, domain I › MutS_I | 0.78 | 66.0 | 6.41e-01 | 97.4% | 81.6% |
| 4142314 | 242.3.1.1 ↗ | a+b two layers › Homing endonucleases-like › DNA repair protein MutS, domain I › DNA repair protein MutS, domain I › MutS_I | 0.78 | 71.0 | 6.80e-01 | 95.7% | 93.1% |
| 4013603 | 242.3.1.0 ↗ | a+b two layers › Homing endonucleases-like › DNA repair protein MutS, domain I › DNA repair protein MutS, domain I | 0.78 | 69.0 | 6.23e-01 | 93.0% | 71.3% |
| 3705111 | 242.3.1.1 ↗ | a+b two layers › Homing endonucleases-like › DNA repair protein MutS, domain I › DNA repair protein MutS, domain I › MutS_I | 0.78 | 66.0 | 5.99e-01 | 95.7% | 68.7% |
| 3631275 | 242.3.1.1 ↗ | a+b two layers › Homing endonucleases-like › DNA repair protein MutS, domain I › DNA repair protein MutS, domain I › MutS_I | 0.77 | 68.0 | 5.93e-01 | 93.0% | 67.3% |
| 4027737 | 242.3.1.1 ↗ | a+b two layers › Homing endonucleases-like › DNA repair protein MutS, domain I › DNA repair protein MutS, domain I › MutS_I | 0.77 | 69.0 | 5.94e-01 | 95.7% | 64.1% |
| 2980705 | 242.3.1.1 ↗ | a+b two layers › Homing endonucleases-like › DNA repair protein MutS, domain I › DNA repair protein MutS, domain I › MutS_I | 0.76 | 68.0 | 5.80e-01 | 93.0% | 62.6% |
| 3781824 | 242.3.1.1 ↗ | a+b two layers › Homing endonucleases-like › DNA repair protein MutS, domain I › DNA repair protein MutS, domain I › MutS_I | 0.76 | 67.0 | 6.44e-01 | 95.7% | 83.1% |
| 4426062 | 242.3.1.1 ↗ | a+b two layers › Homing endonucleases-like › DNA repair protein MutS, domain I › DNA repair protein MutS, domain I › MutS_I | 0.74 | 70.0 | 6.21e-01 | 99.1% | 82.6% |
| 3483416 | 7573.1.1.0 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like | 0.52 | 43.0 | 3.67e-01 | 89.6% | 89.7% |
D2
high
residues 128-173