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js4906-25-2-S21_Prophage_curated_prodigal-single.1__X__X__00223
Bact-Virjs4906-25-2-S21_Prophage_curated_prodigal-single.1__X__X__00223
Identity
- Kingdom:
- phage
Quality
85.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 4-46_96-167
Domain cluster:
rep: IMGVR_UViG_3300002219_000010-3300002219-SCADCLC_1000083292__D4-110
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2dp9A01 | 2.30.130.30 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. | 0.86 | 68.0 | 7.24e-01 | 99.1% | 94.0% |
| 3iuwA00 | 2.30.130.30 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. | 0.82 | 53.0 | 6.43e-01 | 98.3% | 96.2% |
| 1t62B00 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.76 | 72.0 | 6.25e-01 | 100.0% | 79.1% |
| 1sgvA02 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.75 | 38.0 | 4.99e-01 | 99.1% | 88.9% |
| 3s9xA00 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.73 | 68.0 | 6.05e-01 | 99.1% | 81.1% |
| 2b78A01 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.71 | 41.0 | 5.16e-01 | 99.1% | 98.5% |
| 2kkuA00 | 2.30.130.30 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. | 0.71 | 66.0 | 6.18e-01 | 100.0% | 84.2% |
| 1xneA00 | 2.30.130.30 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. | 0.71 | 63.0 | 6.38e-01 | 99.1% | 96.5% |
| 3vseA01 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.69 | 41.0 | 5.08e-01 | 99.1% | 98.6% |
| 3m6wA03 | 2.30.130.60 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › | 0.69 | 38.0 | 4.77e-01 | 98.3% | 92.5% |
| 2p38A02 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.68 | 39.0 | 5.02e-01 | 98.3% | 100.0% |
| 1s04A00 | 2.30.130.30 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. | 0.67 | 59.0 | 6.08e-01 | 99.1% | 100.0% |
| 1q7hA02 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.66 | 43.0 | 4.90e-01 | 100.0% | 88.4% |
| 4dmgA01 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.66 | 39.0 | 4.74e-01 | 99.1% | 93.1% |
| 2as0A01 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.66 | 39.0 | 4.76e-01 | 98.3% | 95.7% |
| 2apoA01 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.66 | 42.0 | 4.52e-01 | 98.3% | 74.7% |
| 3zv0C01 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.65 | 42.0 | 3.89e-01 | 100.0% | 50.0% |
| 7cayA01 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.65 | 44.0 | 4.71e-01 | 100.0% | 80.0% |
| 1sqwA02 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.65 | 42.0 | 4.80e-01 | 99.1% | 91.6% |
| 3c0kA01 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.64 | 39.0 | 4.72e-01 | 99.1% | 97.2% |
| 5zveA02 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.63 | 41.0 | 4.63e-01 | 100.0% | 88.4% |
| 3pieB05 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 26.0 | 3.32e-01 | 77.4% | 65.6% |
| 2gksB01 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.61 | 57.0 | 5.28e-01 | 100.0% | 92.9% |
| 1iq8A04 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.61 | 39.0 | 4.60e-01 | 99.1% | 96.2% |
| 1k28D03 | 2.40.30.150 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacteriophage T4, Gp27, baseplate hub, domain 3 | 0.58 | 44.0 | 4.81e-01 | 100.0% | 95.8% |
| 6vbkA01 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.58 | 44.0 | 4.49e-01 | 100.0% | 82.9% |
| 2j5vA02 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.58 | 45.0 | 4.87e-01 | 100.0% | 100.0% |
| 3cnrB00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.57 | 39.0 | 4.30e-01 | 100.0% | 88.2% |
| 1vr9A02 | 3.10.20.750 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.56 | 29.0 | 3.90e-01 | 96.5% | 100.0% |
| 3cr8A01 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.56 | 48.0 | 4.48e-01 | 100.0% | 75.2% |
| 2aq6A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.55 | 48.0 | 4.56e-01 | 100.0% | 81.8% |
| 2ymaA00 | 3.10.310.60 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.53 | 40.0 | 3.77e-01 | 100.0% | 65.9% |
| 2yziB00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.52 | 31.0 | 2.98e-01 | 100.0% | 49.6% |
| 4esjA01 | 3.40.210.30 | Alpha Beta › 3-Layer(aba) Sandwich › PvuII Endonuclease; Chain A › Dam replacing family, catalytic PD-(D/E)XK domain | 0.51 | 39.0 | 3.58e-01 | 100.0% | 60.9% |
ECOD (94)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4940231 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.90 | 76.0 | 7.16e-01 | 100.0% | 75.2% |
| 5016521 | 1.1.9.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF365 | 0.89 | 76.0 | 7.13e-01 | 100.0% | 75.6% |
| 4995643 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.89 | 76.0 | 6.91e-01 | 100.0% | 70.3% |
| 5079450 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.87 | 73.0 | 6.81e-01 | 100.0% | 72.1% |
| 4122172 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.86 | 73.0 | 7.09e-01 | 100.0% | 81.5% |
| 4229723 | 1.1.9.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF365 | 0.86 | 73.0 | 6.60e-01 | 100.0% | 68.0% |
| 178 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.86 | 68.0 | 6.72e-01 | 100.0% | 79.2% |
| 2105336 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.83 | 73.0 | 6.57e-01 | 100.0% | 70.5% |
| 5035541 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.83 | 65.0 | 7.11e-01 | 98.3% | 98.9% |
| 373012 | 1.1.9.14 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF3850 | 0.82 | 54.0 | 6.40e-01 | 98.3% | 95.0% |
| 4054728 | 1.1.9.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 | 0.82 | 43.0 | 5.84e-01 | 99.1% | 98.3% |
| 4432484 | 1.1.9.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 | 0.82 | 42.0 | 5.69e-01 | 99.1% | 96.7% |
| 4957730 | 1.1.9.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › EVE | 0.81 | 66.0 | 6.11e-01 | 100.0% | 69.3% |
| 4072751 | 1.1.9.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 | 0.80 | 43.0 | 5.73e-01 | 98.3% | 100.0% |
| 4954540 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.80 | 69.0 | 7.11e-01 | 97.4% | 94.5% |
| 5042221 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.80 | 69.0 | 7.27e-01 | 99.1% | 100.0% |
| 4990496 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.80 | 69.0 | 6.95e-01 | 99.1% | 90.4% |
| 5081834 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.80 | 72.0 | 6.82e-01 | 100.0% | 81.5% |
| 4982523 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.80 | 70.0 | 7.04e-01 | 100.0% | 92.2% |
| 4219020 | 1.1.9.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 | 0.79 | 40.0 | 5.44e-01 | 98.3% | 95.0% |
| 5059457 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.79 | 72.0 | 6.87e-01 | 100.0% | 84.6% |
| 4972120 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.79 | 70.0 | 7.16e-01 | 100.0% | 97.3% |
| 4671607 | 1.1.9.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 | 0.79 | 41.0 | 5.50e-01 | 99.1% | 96.7% |
| 4037113 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.79 | 43.0 | 5.67e-01 | 100.0% | 98.4% |
| 4013185 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.79 | 64.0 | 5.76e-01 | 100.0% | 64.7% |
| 4928024 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.78 | 58.0 | 5.59e-01 | 100.0% | 68.8% |
| 4564336 | 1.1.9.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 | 0.78 | 41.0 | 5.44e-01 | 98.3% | 96.7% |
| 4180783 | 1.1.9.14 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF3850 | 0.78 | 55.0 | 6.18e-01 | 100.0% | 92.2% |
| 5022429 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.78 | 68.0 | 6.61e-01 | 99.1% | 84.8% |
| 4932847 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.78 | 58.0 | 5.61e-01 | 100.0% | 70.4% |
| 4972117 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.78 | 70.0 | 6.93e-01 | 100.0% | 91.7% |
| 3199787 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.77 | 63.0 | 5.94e-01 | 100.0% | 72.6% |
| 4048693 | 1.1.9.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 | 0.77 | 44.0 | 5.46e-01 | 100.0% | 91.4% |
| 5016524 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.77 | 63.0 | 5.79e-01 | 100.0% | 68.3% |
| 4141829 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.76 | 39.0 | 5.21e-01 | 100.0% | 95.0% |
| 4582116 | 1.1.9.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 | 0.76 | 42.0 | 5.40e-01 | 98.3% | 95.4% |
| 4632972 | 1.1.9.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 | 0.76 | 45.0 | 5.69e-01 | 98.3% | 100.0% |
| 5070577 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.76 | 68.0 | 7.02e-01 | 98.3% | 99.1% |
| 4087191 | 1.1.9.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 | 0.76 | 41.0 | 5.31e-01 | 98.3% | 93.8% |
| 177 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.75 | 71.0 | 6.38e-01 | 100.0% | 83.0% |
| 4019865 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.75 | 70.0 | 6.42e-01 | 99.1% | 84.8% |
| 5030320 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.75 | 64.0 | 6.24e-01 | 99.1% | 82.4% |
| 4950776 | 1.1.9.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF365 | 0.75 | 70.0 | 6.52e-01 | 100.0% | 85.0% |
| 5011405 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.74 | 43.0 | 5.30e-01 | 100.0% | 92.9% |
| 4932437 | 1.1.9.14 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF3850 | 0.72 | 52.0 | 5.98e-01 | 76.5% | 100.0% |
| 4014658 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.72 | 53.0 | 5.21e-01 | 100.0% | 72.5% |
| 186 | 1.1.9.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_3 | 0.71 | 41.0 | 5.10e-01 | 99.1% | 95.6% |
| 5083501 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.71 | 54.0 | 5.99e-01 | 98.3% | 100.0% |
| 4101732 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.70 | 41.0 | 5.13e-01 | 98.3% | 95.7% |
| 4150890 | 1.1.9.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › UPF0113 | 0.69 | 41.0 | 5.07e-01 | 100.0% | 95.7% |
| 3600186 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.68 | 43.0 | 4.73e-01 | 100.0% | 77.9% |
| 5010432 | 1.1.9.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA | 0.67 | 39.0 | 4.79e-01 | 99.1% | 92.9% |
| 3934702 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.67 | 59.0 | 5.46e-01 | 100.0% | 75.7% |
| 4187980 | 1.1.9.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA | 0.67 | 42.0 | 4.52e-01 | 100.0% | 73.0% |
| 2834726 | 1.1.9.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA | 0.67 | 44.0 | 4.18e-01 | 100.0% | 56.7% |
| 4963284 | 1.1.9.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA | 0.67 | 42.0 | 4.98e-01 | 100.0% | 97.3% |
| 4977675 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.67 | 44.0 | 4.74e-01 | 100.0% | 80.0% |
| 4927245 | 1.1.9.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA | 0.67 | 43.0 | 4.72e-01 | 100.0% | 80.0% |
| 5011041 | 1.1.9.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA | 0.66 | 43.0 | 4.92e-01 | 100.0% | 89.4% |
| 4453731 | 1.1.9.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA | 0.66 | 48.0 | 5.08e-01 | 100.0% | 86.0% |
| 150962 | 1.1.9.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_3 | 0.66 | 39.0 | 4.77e-01 | 99.1% | 94.4% |
| 4956000 | 1.1.9.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_3 | 0.66 | 40.0 | 4.84e-01 | 99.1% | 97.1% |
| 5045765 | 1.1.9.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA | 0.66 | 43.0 | 5.08e-01 | 99.1% | 100.0% |
| 4999514 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.66 | 60.0 | 5.51e-01 | 100.0% | 85.3% |
| 4958559 | 1.1.9.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › UPF0113 | 0.65 | 41.0 | 4.73e-01 | 98.3% | 90.0% |
| 4945851 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.64 | 42.0 | 4.69e-01 | 100.0% | 84.4% |
| 5054829 | 1.1.9.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA | 0.64 | 42.0 | 4.92e-01 | 99.1% | 100.0% |
| 4375569 | 1.1.9.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA | 0.64 | 42.0 | 4.82e-01 | 99.1% | 95.0% |
| 5077746 | 1.1.9.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA | 0.63 | 41.0 | 4.83e-01 | 100.0% | 97.4% |
| 2431072 | 1.1.9.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA | 0.63 | 41.0 | 4.40e-01 | 100.0% | 76.0% |
| 4948219 | 1.1.9.54 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PAPS_reduct | 0.63 | 40.0 | 4.83e-01 | 98.3% | 98.7% |
| 4959440 | 1.1.9.16 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_2 | 0.63 | 59.0 | 5.07e-01 | 100.0% | 82.4% |
| 5083059 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.63 | 41.0 | 4.62e-01 | 100.0% | 89.4% |
| 5071049 | 1.1.9.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA | 0.63 | 41.0 | 4.80e-01 | 99.1% | 100.0% |
| 5045831 | 1.1.9.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA | 0.63 | 38.0 | 4.69e-01 | 98.3% | 100.0% |
| 4589682 | 1.1.9.16 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_2 | 0.62 | 58.0 | 5.14e-01 | 100.0% | 84.4% |
| 5051591 | 1.1.9.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA | 0.62 | 40.0 | 4.63e-01 | 99.1% | 93.8% |
| 3598242 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.62 | 58.0 | 5.27e-01 | 100.0% | 77.9% |
| 4994417 | 1.1.9.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA | 0.62 | 41.0 | 4.00e-01 | 100.0% | 60.8% |
| 4976672 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.61 | 38.0 | 4.60e-01 | 98.3% | 100.0% |
| 4490064 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.61 | 41.0 | 4.86e-01 | 100.0% | 100.0% |
| 5024403 | 1.1.9.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA | 0.61 | 40.0 | 4.58e-01 | 99.1% | 93.8% |
| 4375891 | 1.1.9.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA | 0.61 | 43.0 | 4.82e-01 | 100.0% | 93.3% |
| 3220176 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.61 | 57.0 | 5.20e-01 | 100.0% | 76.7% |
| 184578 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.61 | 57.0 | 5.14e-01 | 100.0% | 74.7% |
| 3375062 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.61 | 57.0 | 5.04e-01 | 100.0% | 76.9% |
| 4243594 | 1.1.9.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA | 0.60 | 45.0 | 4.60e-01 | 100.0% | 81.8% |
| 4961055 | 1.1.9.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA | 0.59 | 40.0 | 4.26e-01 | 100.0% | 79.8% |
| 5023145 | 1.1.9.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA | 0.59 | 39.0 | 4.37e-01 | 100.0% | 87.8% |
| 5009802 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.59 | 54.0 | 4.22e-01 | 100.0% | 55.7% |
| 4080681 | 1.1.9.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA | 0.58 | 45.0 | 4.60e-01 | 100.0% | 85.3% |
| 4562298 | 1.1.9.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA | 0.57 | 44.0 | 4.50e-01 | 100.0% | 81.7% |
| 4981753 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.57 | 40.0 | 4.29e-01 | 100.0% | 87.4% |
| 1290972 | 1.1.9.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA | 0.57 | 44.0 | 4.36e-01 | 100.0% | 77.2% |
D2
medium
residues 53-94
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5kcoA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 54.0 | 4.94e-01 | 92.9% | 98.3% |
| 4gi3C00 | 3.30.60.30 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.68 | 50.0 | 4.55e-01 | 81.0% | 63.2% |
| 2eqjA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 52.0 | 4.59e-01 | 90.5% | 77.3% |
| 4pytA02 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.62 | 49.0 | 3.55e-01 | 90.5% | 40.6% |
| 6qlyA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.62 | 47.0 | 3.95e-01 | 90.5% | 72.3% |
| 3ce2A02 | 1.10.287.830 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › putative peptidase helix hairpin domain like | 0.61 | 43.0 | 4.26e-01 | 76.2% | 78.7% |
| 3puaA01 | 2.60.120.650 | Mainly Beta › Sandwich › Jelly Rolls › Cupin | 0.60 | 46.0 | 2.89e-01 | 92.9% | 75.2% |
| 1eazA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.59 | 48.0 | 3.73e-01 | 97.6% | 77.7% |
| 1plsA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.58 | 46.0 | 3.57e-01 | 100.0% | 70.8% |
| 2dn6A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 44.0 | 3.40e-01 | 95.2% | 68.7% |
| 2v3sA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.57 | 41.0 | 3.30e-01 | 81.0% | 100.0% |
| 2hlyA00 | 3.10.550.10 | Alpha Beta › Roll › Atu2299-like › Hypothetical protein Atu2299 | 0.57 | 44.0 | 3.00e-01 | 100.0% | 50.7% |
| 2jz6A01 | 2.30.170.40 | Mainly Beta › Roll › Ribosomal Protein L24e; Chain: T; › Ribosomal protein L28/L24 | 0.57 | 40.0 | 3.91e-01 | 76.2% | 70.0% |
| 5mj6A03 | 2.60.40.1910 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 44.0 | 3.66e-01 | 88.1% | 67.5% |
| 2vfrA02 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.56 | 46.0 | 3.34e-01 | 97.6% | 52.3% |
| 4nlcA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.55 | 41.0 | 2.61e-01 | 83.3% | 55.7% |
| 1d0nA05 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.55 | 38.0 | 3.02e-01 | 73.8% | 36.5% |
| 4xtvB02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 39.0 | 3.88e-01 | 83.3% | 93.8% |
| 2jvuA00 | 2.60.40.2290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 43.0 | 3.47e-01 | 100.0% | 73.5% |
| 1h0hB01 | 3.30.70.20 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 39.0 | 2.78e-01 | 81.0% | 89.3% |
| 2arpF02 | 3.30.60.30 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.53 | 37.0 | 3.16e-01 | 73.8% | 75.0% |
| 2aegA02 | 3.90.1680.20 | Alpha Beta › Alpha-Beta Complex › hypothetical protein yedk fold › | 0.52 | 45.0 | 3.14e-01 | 100.0% | 39.0% |
| 5owvD01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 40.0 | 2.68e-01 | 100.0% | 25.2% |
| 4avaA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.50 | 38.0 | 2.90e-01 | 100.0% | 66.7% |
| 4kncA02 | 2.60.120.1380 | Mainly Beta › Sandwich › Jelly Rolls › C-terminal carbohydrate-binding module | 0.50 | 38.0 | 2.97e-01 | 95.2% | 82.9% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4990637 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.66 | 49.0 | 4.00e-01 | 83.3% | 59.0% |
| 154312 | 4.1.1.65 ↗ | beta barrels › SH3 › SH3 › SH3 › 53-BP1_Tudor | 0.65 | 51.0 | 4.42e-01 | 90.5% | 72.9% |
| 3493732 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.64 | 48.0 | 3.87e-01 | 90.5% | 66.3% |
| 3416454 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.62 | 50.0 | 4.75e-01 | 100.0% | 78.0% |
| 3704895 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.62 | 46.0 | 4.70e-01 | 81.0% | 94.9% |
| 3180626 | 4.8.1.36 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF7141 | 0.61 | 45.0 | 4.32e-01 | 92.9% | 70.0% |
| 3776602 | 7590.1.1.7 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › MID_MedPIWI | 0.59 | 42.0 | 2.69e-01 | 81.0% | 91.5% |
| 5027909 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.58 | 43.0 | 3.85e-01 | 81.0% | 60.0% |
| 4135543 | 221.1.1.17 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Stap_Strp_tox_C | 0.58 | 41.0 | 3.10e-01 | 81.0% | 89.1% |
| 3282019 | 10.37.1.0 ↗ | beta sandwiches › jelly-roll › TerD › TerD | 0.57 | 43.0 | 2.91e-01 | 88.1% | 87.0% |
| 4946461 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.56 | 43.0 | 2.76e-01 | 88.1% | 44.8% |
| 3832766 | 245.1.1.0 ↗ | a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 | 0.56 | 40.0 | 3.07e-01 | 76.2% | 69.2% |
| 3198282 | 2005.3.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › Pyoverdine biosynthesis protein PvcA › Pyoverdine biosynthesis protein PvcA › DIT1_PvcA | 0.56 | 45.0 | 2.76e-01 | 100.0% | 81.9% |
| 3312688 | 245.1.1.1 ↗ | a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 › RNase_PH_C | 0.55 | 39.0 | 3.06e-01 | 78.6% | 69.5% |
| 3276937 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.55 | 39.0 | 4.05e-01 | 76.2% | 100.0% |
| 4305473 | 384.1.1.0 ↗ | few secondary structure elements › BPTI-like › BPTI-like › BPTI-like | 0.55 | 37.0 | 3.50e-01 | 100.0% | 56.4% |
| 3399251 | 245.1.1.1 ↗ | a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 › RNase_PH_C | 0.55 | 38.0 | 3.17e-01 | 78.6% | 63.3% |
| 4125602 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.54 | 44.0 | 4.35e-01 | 100.0% | 91.1% |
| 3665005 | 304.102.1.1 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_2 | 0.54 | 38.0 | 2.37e-01 | 78.6% | 12.5% |
| 3529581 | 103.1.1.67 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UPF0515 | 0.53 | 43.0 | 4.27e-01 | 97.6% | 97.8% |
| 3640834 | 245.1.1.0 ↗ | a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 | 0.52 | 37.0 | 2.84e-01 | 76.2% | 47.8% |
| 4972924 | 2008.1.1.16 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat | 0.51 | 37.0 | 2.93e-01 | 85.7% | 59.1% |
| 5779 | 245.1.1.1 ↗ | a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 › RNase_PH_C | 0.50 | 35.0 | 2.91e-01 | 76.2% | 58.4% |