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js4906-26-2_S25_scaffold_167_prodigal-single.1__X__X__00062
Bact-Virjs4906-26-2_S25_scaffold_167_prodigal-single.1__X__X__00062
Identity
- Kingdom:
- phage
Quality
71.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 239-373
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2yn7A00 | 1.10.3160.10 | Mainly Alpha › Orthogonal Bundle › Bbcrasp-1 › Bbcrasp-1 | 0.60 | 44.0 | 3.75e-01 | 91.1% | 48.1% |
| 6lcuA02 | 1.10.10.470 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Maltooligosyl trehalose synthase; domain 4 | 0.56 | 32.0 | 3.58e-01 | 89.6% | 70.5% |
| 3zsuA00 | 1.20.120.290 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Oxygen-evolving enhancer protein 3 (PsbQ), four-helix up-down bundle | 0.55 | 35.0 | 3.75e-01 | 82.2% | 73.7% |
| 4m70I00 | 1.20.5.4130 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.54 | 40.0 | 4.39e-01 | 92.6% | 95.4% |
| 1vi0A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.53 | 37.0 | 3.66e-01 | 86.7% | 66.2% |
| 3nvoB02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.53 | 30.0 | 3.25e-01 | 100.0% | 63.8% |
| 4jioA01 | 1.20.120.560 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › alix/aip1 in complex with the ypdl late domain | 0.52 | 39.0 | 3.66e-01 | 77.0% | 82.0% |
| 1qv9A02 | 6.10.140.120 | Special › Helix non-globular › Helix Hairpins › | 0.52 | 38.0 | 4.32e-01 | 83.7% | 100.0% |
| 3vprA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.52 | 36.0 | 3.59e-01 | 88.9% | 67.6% |
| 1t10A01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.51 | 41.0 | 3.03e-01 | 87.4% | 77.0% |
| 1xvhB00 | 1.20.120.1850 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Ebh helix bundles repeating unit (S and A modules) | 0.50 | 34.0 | 3.68e-01 | 94.1% | 80.5% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3240462 | 604.1.1.1 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin | 0.55 | 32.0 | 3.43e-01 | 99.3% | 64.3% |
| 3505434 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.55 | 33.0 | 3.43e-01 | 100.0% | 62.4% |
| 4968704 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.55 | 38.0 | 3.86e-01 | 83.7% | 72.3% |
| 4971284 | 5076.2.1.13 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ › DUF7847 | 0.54 | 41.0 | 3.44e-01 | 78.5% | 72.3% |
| 3479515 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.53 | 31.0 | 3.26e-01 | 100.0% | 61.6% |
| 3471400 | 5050.1.1.31 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › SLC52_ribofla_tr | 0.53 | 47.0 | 4.23e-01 | 99.3% | 74.2% |
| 3360588 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.53 | 38.0 | 3.24e-01 | 76.3% | 88.3% |
| 3306743 | 192.29.1.101 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Rx_N | 0.52 | 37.0 | 3.72e-01 | 71.9% | 92.6% |
| 5020412 | 601.4.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains | 0.51 | 32.0 | 3.60e-01 | 97.8% | 81.0% |
| 3651012 | 3755.4.1.17 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Rx_N | 0.50 | 44.0 | 4.37e-01 | 94.1% | 100.0% |
| 3516443 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.50 | 31.0 | 2.89e-01 | 80.0% | 48.8% |
D2
high
residues 468-575
Domain cluster:
rep: LC597490.1__BCO16078.1__X__00025__D258-356
CATH (94)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4dzzA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.77 | 61.0 | 4.85e-01 | 83.3% | 99.0% |
| 2gfqA02 | 3.40.50.10700 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › AF0625-like | 0.73 | 52.0 | 5.67e-01 | 73.1% | 100.0% |
| 5cgaE00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.73 | 61.0 | 4.58e-01 | 89.8% | 78.8% |
| 4d02A02 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.72 | 55.0 | 5.00e-01 | 80.6% | 100.0% |
| 2v0nA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.72 | 58.0 | 5.28e-01 | 87.0% | 81.5% |
| 2n3zA00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.71 | 53.0 | 5.57e-01 | 82.4% | 86.9% |
| 1jw9B00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.70 | 60.0 | 4.67e-01 | 94.4% | 80.0% |
| 1yqeA02 | 3.40.50.10700 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › AF0625-like | 0.70 | 56.0 | 5.93e-01 | 85.2% | 97.9% |
| 3nl6C02 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.70 | 58.0 | 4.22e-01 | 89.8% | 75.5% |
| 3ujpB01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.69 | 54.0 | 4.83e-01 | 82.4% | 79.1% |
| 2lndA00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.69 | 53.0 | 5.30e-01 | 81.5% | 90.2% |
| 1pq4A01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.68 | 54.0 | 4.82e-01 | 84.3% | 79.6% |
| 1c3qA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.68 | 58.0 | 4.26e-01 | 92.6% | 76.1% |
| 1rifA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.68 | 53.0 | 4.42e-01 | 84.3% | 78.1% |
| 2wb4B01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.67 | 61.0 | 4.51e-01 | 100.0% | 62.2% |
| 2kpoA00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.67 | 52.0 | 5.24e-01 | 83.3% | 91.8% |
| 1rljA00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.67 | 57.0 | 5.27e-01 | 91.7% | 94.1% |
| 3r0vA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.67 | 53.0 | 4.01e-01 | 85.2% | 93.0% |
| 3kb6A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.66 | 50.0 | 4.74e-01 | 81.5% | 93.1% |
| 5gizA01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.65 | 51.0 | 4.82e-01 | 83.3% | 87.6% |
| 4g65A03 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.65 | 47.0 | 4.38e-01 | 75.0% | 90.3% |
| 5es6A01 | 3.40.50.170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Formyl transferase, N-terminal domain | 0.65 | 50.0 | 4.17e-01 | 82.4% | 77.4% |
| 3fxaA00 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.65 | 58.0 | 4.80e-01 | 98.1% | 78.0% |
| 3lucA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.65 | 51.0 | 4.90e-01 | 86.1% | 94.5% |
| 2xdqA03 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.64 | 52.0 | 4.99e-01 | 87.0% | 79.0% |
| 1t6t200 | 3.40.1360.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dna Topoisomerase Vi A Subunit; Chain: A, domain 2 › | 0.64 | 52.0 | 5.24e-01 | 89.8% | 99.1% |
| 5uqiA00 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.64 | 57.0 | 4.73e-01 | 98.1% | 79.3% |
| 3dnfA03 | 3.40.1010.20 | Alpha Beta › 3-Layer(aba) Sandwich › Cobalt-precorrin-4 Transmethylase; domain 1 › 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, catalytic domain | 0.64 | 48.0 | 5.04e-01 | 80.6% | 90.9% |
| 3tixB02 | 3.40.1010.30 | Alpha Beta › 3-Layer(aba) Sandwich › Cobalt-precorrin-4 Transmethylase; domain 1 › | 0.64 | 55.0 | 5.29e-01 | 95.4% | 97.6% |
| 2an1D01 | 3.40.50.10330 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Probable inorganic polyphosphate/atp-NAD kinase; domain 1 | 0.64 | 51.0 | 4.75e-01 | 86.1% | 74.4% |
| 2nvwB01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.63 | 54.0 | 4.51e-01 | 95.4% | 88.3% |
| 7kx9A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 56.0 | 5.14e-01 | 100.0% | 94.4% |
| 1nijA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 49.0 | 3.99e-01 | 83.3% | 97.0% |
| 3tbfA02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.62 | 55.0 | 4.97e-01 | 98.1% | 94.6% |
| 3gdgA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.62 | 52.0 | 3.95e-01 | 92.6% | 89.5% |
| 3uenA02 | 3.40.50.10190 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain | 0.62 | 50.0 | 5.13e-01 | 91.7% | 89.5% |
| 2aefA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.62 | 46.0 | 4.58e-01 | 79.6% | 97.4% |
| 3hueA03 | 3.40.50.11080 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.62 | 44.0 | 4.72e-01 | 93.5% | 88.0% |
| 2r47A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.61 | 52.0 | 4.83e-01 | 93.5% | 98.6% |
| 5o1pA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.61 | 51.0 | 4.42e-01 | 91.7% | 71.7% |
| 4p1zA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.61 | 49.0 | 4.74e-01 | 88.9% | 89.8% |
| 4toiA01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.61 | 55.0 | 4.67e-01 | 99.1% | 96.6% |
| 3jx9A00 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.61 | 55.0 | 4.72e-01 | 98.1% | 88.2% |
| 3qq5A03 | 3.40.50.11410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.61 | 50.0 | 4.98e-01 | 88.0% | 92.8% |
| 4n7bA03 | 3.40.1010.20 | Alpha Beta › 3-Layer(aba) Sandwich › Cobalt-precorrin-4 Transmethylase; domain 1 › 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, catalytic domain | 0.61 | 50.0 | 5.22e-01 | 88.0% | 100.0% |
| 1lsuA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.61 | 46.0 | 4.26e-01 | 79.6% | 73.9% |
| 3l4bC01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.61 | 46.0 | 4.56e-01 | 81.5% | 99.1% |
| 3imkA00 | 3.40.50.450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.60 | 51.0 | 4.51e-01 | 92.6% | 77.2% |
| 1a9xB02 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.60 | 52.0 | 4.08e-01 | 94.4% | 85.5% |
| 3mfqA01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.60 | 47.0 | 4.31e-01 | 84.3% | 86.5% |
| 2eklA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.60 | 47.0 | 4.58e-01 | 86.1% | 96.7% |
| 1jmvA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.59 | 42.0 | 3.87e-01 | 73.1% | 99.3% |
| 3nd5A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.59 | 42.0 | 3.76e-01 | 73.1% | 76.3% |
| 3ndcA01 | 3.40.1010.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cobalt-precorrin-4 Transmethylase; domain 1 › Tetrapyrrole methylase, N-terminal domain | 0.59 | 45.0 | 4.47e-01 | 80.6% | 81.4% |
| 2w42B01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.59 | 52.0 | 4.62e-01 | 99.1% | 86.1% |
| 3b5vA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.59 | 48.0 | 3.69e-01 | 88.0% | 74.9% |
| 7zllA01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.59 | 45.0 | 3.34e-01 | 81.5% | 35.4% |
| 4ncbA05 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.58 | 50.0 | 4.59e-01 | 96.3% | 86.4% |
| 3qocA00 | 3.40.350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Creatine Amidinohydrolase; Chain A, domain 1 › Creatinase/prolidase N-terminal domain | 0.58 | 46.0 | 4.33e-01 | 84.3% | 89.9% |
| 1w4rA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 47.0 | 4.44e-01 | 88.0% | 72.0% |
| 3fwzA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.58 | 42.0 | 3.91e-01 | 77.8% | 58.6% |
| 7d73E01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.58 | 45.0 | 3.58e-01 | 82.4% | 43.8% |
| 5dj1A02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.58 | 50.0 | 4.00e-01 | 100.0% | 77.0% |
| 3f6tA03 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.58 | 51.0 | 4.10e-01 | 100.0% | 90.0% |
| 4ixoA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.57 | 50.0 | 3.98e-01 | 100.0% | 62.6% |
| 2zpaA01 | 3.40.50.11040 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.57 | 47.0 | 4.08e-01 | 92.6% | 83.8% |
| 3mweB01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.57 | 45.0 | 4.22e-01 | 86.1% | 93.5% |
| 2yhaA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.57 | 50.0 | 4.65e-01 | 98.1% | 93.5% |
| 3nhvC01 | 3.40.250.10 | Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain | 0.56 | 45.0 | 4.43e-01 | 90.7% | 80.0% |
| 3uhjC01 | 3.40.50.1970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.56 | 49.0 | 4.38e-01 | 97.2% | 88.8% |
| 3ftbA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.56 | 48.0 | 3.92e-01 | 99.1% | 77.9% |
| 1d5rA01 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.55 | 43.0 | 3.74e-01 | 84.3% | 81.0% |
| 3ngxA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 46.0 | 4.41e-01 | 91.7% | 90.4% |
| 1ohcA02 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.55 | 43.0 | 3.75e-01 | 85.2% | 81.7% |
| 4q0cA02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.55 | 38.0 | 4.00e-01 | 78.7% | 83.2% |
| 4ifeA02 | 3.30.420.240 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.55 | 47.0 | 3.78e-01 | 98.1% | 99.1% |
| 2p4gA00 | 3.40.430.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A | 0.54 | 47.0 | 3.57e-01 | 93.5% | 63.7% |
| 1xt8A02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.54 | 38.0 | 4.02e-01 | 77.8% | 85.7% |
| 3fkdA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.54 | 47.0 | 3.84e-01 | 99.1% | 79.0% |
| 1uu1A02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.54 | 46.0 | 3.89e-01 | 99.1% | 83.7% |
| 1mrzA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.54 | 41.0 | 3.63e-01 | 80.6% | 72.8% |
| 3i4jB02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.54 | 48.0 | 3.71e-01 | 100.0% | 67.9% |
| 4i62A02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.54 | 37.0 | 3.94e-01 | 82.4% | 83.9% |
| 4powA02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.53 | 44.0 | 4.34e-01 | 91.7% | 83.2% |
| 5lomA02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.53 | 36.0 | 3.85e-01 | 76.9% | 83.5% |
| 7k3zG01 | 3.50.7.10 | Alpha Beta › 3-Layer(bba) Sandwich › GroEL › GroEL | 0.53 | 41.0 | 3.29e-01 | 82.4% | 54.9% |
| 3mpkA02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.53 | 37.0 | 3.88e-01 | 78.7% | 83.2% |
| 2fokA03 | 3.40.91.30 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.52 | 45.0 | 3.90e-01 | 97.2% | 96.6% |
| 1sr8A03 | 3.40.50.10720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › CbiD-like domains | 0.52 | 35.0 | 3.80e-01 | 70.4% | 83.3% |
| 4h5gA02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.52 | 37.0 | 3.84e-01 | 78.7% | 84.2% |
| 3e8sA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 45.0 | 3.65e-01 | 100.0% | 85.9% |
| 3m33A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 46.0 | 3.70e-01 | 100.0% | 88.2% |
| 2orwB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 45.0 | 4.33e-01 | 100.0% | 89.0% |
| 3eucA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.50 | 43.0 | 3.59e-01 | 100.0% | 76.8% |
ECOD (98)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4969233 | 2007.1.3.73 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › DUF2325 | 0.81 | 64.0 | 6.63e-01 | 83.3% | 96.0% |
| 4936294 | 2007.1.3.73 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › DUF2325 | 0.79 | 64.0 | 6.38e-01 | 85.2% | 89.1% |
| 4615208 | 2007.2.2.7 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Phosphotyrosine protein phosphatases I-like › DUF2325 | 0.79 | 62.0 | 6.46e-01 | 82.4% | 97.0% |
| 5054319 | 4978.1.1.1 ↗ | a/b three-layered sandwiches › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › tRNA_deacylase | 0.74 | 52.0 | 5.74e-01 | 73.1% | 100.0% |
| 3289988 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.73 | 56.0 | 4.95e-01 | 82.4% | 82.5% |
| 3274341 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.73 | 57.0 | 4.04e-01 | 83.3% | 69.1% |
| 3975014 | 2007.1.3.12 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › VpsT-like_REC | 0.73 | 59.0 | 5.18e-01 | 86.1% | 76.1% |
| 3879317 | 2003.1.1.79 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ISPD_C | 0.73 | 57.0 | 4.99e-01 | 83.3% | 90.6% |
| 4008388 | 2003.1.1.68 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › XdhC_C | 0.72 | 56.0 | 5.29e-01 | 83.3% | 96.2% |
| 4049592 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.71 | 60.0 | 4.31e-01 | 89.8% | 80.6% |
| 3592079 | 7590.1.1.0 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs | 0.71 | 56.0 | 4.85e-01 | 85.2% | 76.5% |
| 4646263 | 2003.1.1.31 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › CbiJ | 0.71 | 54.0 | 5.28e-01 | 81.5% | 99.2% |
| 4615601 | 2003.1.1.31 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › CbiJ | 0.71 | 55.0 | 5.26e-01 | 82.4% | 99.2% |
| 3941749 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.70 | 53.0 | 5.36e-01 | 80.6% | 94.5% |
| 3613184 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.70 | 55.0 | 4.68e-01 | 85.2% | 66.1% |
| 4517287 | 2007.1.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › GATase | 0.70 | 61.0 | 4.84e-01 | 95.4% | 92.6% |
| 4181728 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.69 | 62.0 | 5.65e-01 | 99.1% | 89.5% |
| 4994394 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.69 | 53.0 | 3.88e-01 | 81.5% | 80.4% |
| 4579167 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.69 | 59.0 | 4.49e-01 | 92.6% | 78.0% |
| 5065088 | 2007.1.1.63 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › PF27016 | 0.69 | 52.0 | 3.47e-01 | 81.5% | 68.1% |
| 3908150 | 7568.1.1.8 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT_3 | 0.68 | 51.0 | 5.44e-01 | 88.9% | 90.5% |
| 4108091 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.67 | 57.0 | 4.28e-01 | 92.6% | 79.5% |
| None | — | 0.67 | 54.0 | 5.46e-01 | 85.2% | 100.0% | |
| 4024365 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.67 | 57.0 | 4.21e-01 | 92.6% | 78.9% |
| 4619533 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.67 | 57.0 | 4.19e-01 | 92.6% | 77.9% |
| 4948683 | 2006.1.3.7 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_4 | 0.67 | 53.0 | 5.15e-01 | 85.2% | 92.5% |
| 4350349 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.67 | 57.0 | 4.15e-01 | 93.5% | 78.0% |
| 4990474 | 2007.24.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › AtpF-like › AtpF-like › ATP-synt_F | 0.67 | 45.0 | 4.80e-01 | 70.4% | 80.0% |
| 3178281 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.66 | 50.0 | 3.29e-01 | 80.6% | 29.6% |
| 5024272 | 7597.1.1.0 ↗ | a/b three-layered sandwiches › Endolysin C-terminal domain › Endolysin C-terminal domain › Endolysin C-terminal domain | 0.66 | 51.0 | 4.87e-01 | 83.3% | 92.8% |
| 4932103 | 2006.1.3.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim | 0.65 | 55.0 | 5.34e-01 | 92.6% | 99.2% |
| 4970599 | 2006.1.3.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim | 0.65 | 54.0 | 5.00e-01 | 91.7% | 86.4% |
| 9923 | 2006.1.3.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim | 0.65 | 53.0 | 5.31e-01 | 88.9% | 99.1% |
| 4975817 | 2006.1.3.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim | 0.65 | 53.0 | 4.95e-01 | 89.8% | 85.2% |
| 4055018 | 2003.1.8.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › MurCD/PglD N-terminal domain-like › CoA_binding_3 | 0.64 | 49.0 | 4.66e-01 | 80.6% | 86.2% |
| 3938905 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.64 | 56.0 | 5.06e-01 | 96.3% | 90.7% |
| 4032684 | 2003.1.11.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › 2-Hacid_dh | 0.64 | 50.0 | 4.71e-01 | 82.4% | 95.4% |
| 5063199 | 7592.1.1.6 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › Csa3_N | 0.64 | 50.0 | 4.68e-01 | 83.3% | 94.8% |
| 5001032 | 2007.1.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like | 0.64 | 50.0 | 3.78e-01 | 83.3% | 94.3% |
| 4236821 | 2006.1.3.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim | 0.64 | 54.0 | 5.23e-01 | 94.4% | 94.4% |
| 4951653 | 2007.1.14.5 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › Peripla_BP_2 | 0.64 | 52.0 | 4.27e-01 | 88.0% | 69.5% |
| 5037557 | 2006.1.3.6 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_2 | 0.64 | 53.0 | 5.13e-01 | 91.7% | 93.6% |
| 1720143 | 2007.12.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Beta-D-glucan exohydrolase, C-terminal domain › Beta-D-glucan exohydrolase, C-terminal domain | 0.64 | 57.0 | 5.01e-01 | 99.1% | 86.7% |
| 3964961 | 2004.1.1.117 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Terminase_3 | 0.64 | 53.0 | 4.27e-01 | 90.7% | 80.0% |
| 4277518 | 7563.1.1.4 ↗ | a/b three-layered sandwiches › MCP/YpsA-related › MCP/YpsA-related › MCP/YpsA-related › YpsA | 0.63 | 46.0 | 3.90e-01 | 75.9% | 95.1% |
| 3386320 | 7524.1.1.0 ↗ | a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like | 0.63 | 56.0 | 4.74e-01 | 100.0% | 96.8% |
| 138112 | 2003.1.1.28 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N | 0.63 | 47.0 | 4.45e-01 | 79.6% | 88.0% |
| 3988979 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.62 | 46.0 | 4.67e-01 | 78.7% | 77.3% |
| 4967361 | 2003.1.1.65 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_binding_7 | 0.62 | 51.0 | 4.48e-01 | 88.0% | 74.4% |
| 5073396 | 7510.1.1.0 ↗ | a/b three-layered sandwiches › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like | 0.62 | 55.0 | 4.99e-01 | 98.1% | 94.5% |
| 4939192 | 2003.1.1.65 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_binding_7 | 0.62 | 50.0 | 4.82e-01 | 85.2% | 91.7% |
| 4495998 | 7588.1.1.1 ↗ | a/b three-layered sandwiches › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › LYTB | 0.62 | 49.0 | 5.01e-01 | 88.0% | 86.7% |
| 4979587 | 2006.1.3.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain | 0.62 | 51.0 | 5.11e-01 | 91.7% | 99.1% |
| 4422264 | 7588.1.1.1 ↗ | a/b three-layered sandwiches › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › LYTB | 0.62 | 47.0 | 4.83e-01 | 80.6% | 88.0% |
| 4939281 | 2007.3.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains | 0.61 | 48.0 | 4.19e-01 | 85.2% | 93.5% |
| None | — | 0.61 | 43.0 | 3.86e-01 | 73.1% | 79.4% | |
| 3259605 | 7568.1.1.0 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain | 0.61 | 49.0 | 5.21e-01 | 89.8% | 100.0% |
| 3988514 | 2003.1.1.71 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › CoA_binding_3 | 0.61 | 48.0 | 4.72e-01 | 86.1% | 95.0% |
| 5038501 | 2003.1.11.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › 2-Hacid_dh | 0.61 | 47.0 | 4.55e-01 | 82.4% | 97.5% |
| 3702340 | 2007.2.3.11 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › PTP-SAK | 0.61 | 43.0 | 3.56e-01 | 85.2% | 42.2% |
| 5007345 | 2006.1.3.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim | 0.61 | 51.0 | 4.95e-01 | 92.6% | 93.3% |
| 3223797 | 7590.1.1.2 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Piwi | 0.60 | 53.0 | 4.68e-01 | 99.1% | 82.4% |
| 3981382 | 2007.1.3.31 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › MlrA_C | 0.60 | 43.0 | 4.51e-01 | 75.9% | 89.0% |
| 3649691 | 2004.1.1.299 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF1995 | 0.60 | 54.0 | 4.13e-01 | 99.1% | 79.6% |
| 4943748 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.60 | 42.0 | 3.73e-01 | 73.1% | 74.5% |
| 5006370 | 2003.1.1.65 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_binding_7 | 0.60 | 47.0 | 4.31e-01 | 85.2% | 85.5% |
| 2625870 | 7590.1.1.5 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Ago_Mid | 0.60 | 51.0 | 4.62e-01 | 95.4% | 82.9% |
| 4667208 | 2005.1.1.13 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like | 0.59 | 42.0 | 3.83e-01 | 73.1% | 82.8% |
| 5042219 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.59 | 47.0 | 4.59e-01 | 88.9% | 77.5% |
| 4387146 | 7588.1.1.1 ↗ | a/b three-layered sandwiches › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › LYTB | 0.59 | 46.0 | 4.73e-01 | 88.0% | 89.0% |
| 5082884 | 2005.1.1.13 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like | 0.59 | 42.0 | 3.71e-01 | 74.1% | 76.2% |
| 3404837 | 7585.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins | 0.59 | 50.0 | 4.47e-01 | 94.4% | 95.5% |
| 5011063 | 2007.6.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain | 0.59 | 51.0 | 5.14e-01 | 95.4% | 94.5% |
| 4413280 | 2005.1.1.13 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like | 0.59 | 42.0 | 3.79e-01 | 74.1% | 83.3% |
| 3611837 | 7590.1.1.0 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs | 0.58 | 50.0 | 4.55e-01 | 100.0% | 81.3% |
| 5062511 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.58 | 42.0 | 4.43e-01 | 76.9% | 100.0% |
| 4967280 | 2003.1.11.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like | 0.57 | 45.0 | 4.07e-01 | 84.3% | 77.3% |
| 4990433 | 2005.1.1.13 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like | 0.57 | 42.0 | 3.73e-01 | 75.9% | 80.5% |
| 2114526 | 7523.1.1.30 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_11 | 0.57 | 34.0 | 3.74e-01 | 82.4% | 73.8% |
| 3647942 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.56 | 50.0 | 4.11e-01 | 100.0% | 83.4% |
| 1102197 | 101.1.2.163 ↗ | alpha arrays › HTH › HTH › winged helix domain › PMT2_N | 0.56 | 46.0 | 4.04e-01 | 91.7% | 88.3% |
| 3786568 | 2004.1.1.1087 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RRM_1 | 0.56 | 44.0 | 4.44e-01 | 88.0% | 84.5% |
| 3989169 | 2003.1.1.28 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N | 0.56 | 44.0 | 4.13e-01 | 87.0% | 72.9% |
| 3948974 | 2007.2.5.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Rhodanese/Cell cycle control phosphatase › Rhodanese | 0.55 | 45.0 | 4.40e-01 | 90.7% | 80.8% |
| 5046872 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.55 | 48.0 | 4.01e-01 | 97.2% | 88.9% |
| 5014500 | 7577.1.1.1 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_1_2 | 0.55 | 47.0 | 3.67e-01 | 99.1% | 59.2% |
| 3966021 | 7603.1.1.1 ↗ | a/b three-layered sandwiches › Immunomodulating metalloprotease IMPa N-terminal domain › Immunomodulating metalloprotease IMPa N-terminal domain › Immunomodulating metalloprotease IMPa N-terminal domain › IMPa_N_2 | 0.55 | 44.0 | 3.53e-01 | 88.9% | 70.7% |
| 4928484 | 2005.1.1.13 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like | 0.54 | 43.0 | 3.79e-01 | 86.1% | 97.6% |
| 3165471 | 2003.1.1.28 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N | 0.54 | 42.0 | 3.92e-01 | 85.2% | 73.6% |
| 4940019 | 7582.1.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like domain in CbiD › Rossmann-like domain in CbiD › Rossmann-like domain in CbiD › TrkA_N | 0.53 | 40.0 | 3.88e-01 | 82.4% | 89.6% |
| 4930272 | 7582.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like domain in CbiD › Rossmann-like domain in CbiD › Rossmann-like domain in CbiD | 0.53 | 40.0 | 3.82e-01 | 82.4% | 86.2% |
| 4981510 | 7577.1.1.1 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_1_2 | 0.52 | 45.0 | 3.79e-01 | 99.1% | 85.6% |
| 3737889 | 2007.2.3.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase2 | 0.52 | 40.0 | 3.45e-01 | 85.2% | 76.2% |
| 167407 | 2003.1.11.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › 2-Hacid_dh | 0.51 | 40.0 | 4.14e-01 | 86.1% | 91.9% |
| 138718 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.51 | 46.0 | 3.70e-01 | 100.0% | 88.2% |
| 3243569 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.51 | 39.0 | 3.13e-01 | 82.4% | 75.7% |
| 1518867 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.51 | 41.0 | 4.00e-01 | 93.5% | 80.5% |
| 4881811 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.51 | 36.0 | 3.84e-01 | 78.7% | 90.9% |
D3
medium
residues 24-47_150-238
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3k8pC02 | 1.10.357.150 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › | 0.54 | 38.0 | 3.29e-01 | 74.3% | 70.5% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3187414 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.66 | 49.0 | 3.00e-01 | 78.8% | 60.4% |
| 3637948 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.62 | 44.0 | 2.72e-01 | 83.2% | 12.8% |
| 5041173 | 2006.1.3.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain | 0.54 | 41.0 | 3.98e-01 | 86.7% | 71.2% |
| 3647721 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 39.0 | 3.65e-01 | 74.3% | 64.4% |
| 3669604 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.52 | 39.0 | 4.02e-01 | 79.6% | 96.4% |
| 5010146 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.51 | 31.0 | 3.27e-01 | 97.3% | 66.7% |
D4
medium
residues 48-149
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1s7zA01 | 1.20.120.780 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DNA mimic ocr | 0.55 | 37.0 | 3.79e-01 | 85.3% | 69.3% |
| 3mzvA00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.54 | 40.0 | 2.88e-01 | 77.5% | 33.7% |
| 2rjiA00 | 1.10.1740.170 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › Erythrocyte binding antigen 175 region VI | 0.53 | 32.0 | 3.57e-01 | 96.1% | 75.0% |
ECOD (1)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4932047 | 4048.1.1.1 ↗ | alpha bundles › Second alpha-helical domain in heme-dependent catalases › Second alpha-helical domain in heme-dependent catalases › Second alpha-helical domain in heme-dependent catalases › Catalase-rel | 0.54 | 33.0 | 3.51e-01 | 76.5% | 67.8% |