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js4906-26-2_S25_scaffold_55_prodigal-single.1__X__X__00025
Bact-Virjs4906-26-2_S25_scaffold_55_prodigal-single.1__X__X__00025
Identity
- Kingdom:
- phage
Quality
85.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-31
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hgkE00 | 1.20.1280.110 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.80 | 64.0 | 4.97e-01 | 100.0% | 40.3% |
| 3u7iA00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.73 | 59.0 | 3.58e-01 | 100.0% | 29.4% |
| 1vq8V00 | 1.10.287.310 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.68 | 53.0 | 4.22e-01 | 87.1% | 43.1% |
| 7vi8A01 | 3.20.20.370 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase/deacetylase | 0.65 | 49.0 | 2.87e-01 | 80.6% | 24.1% |
| 2xr1A03 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.65 | 45.0 | 2.69e-01 | 77.4% | 9.1% |
| 4at7B02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.63 | 52.0 | 3.25e-01 | 93.5% | 15.7% |
| 3b82A06 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 42.0 | 2.84e-01 | 71.0% | 19.0% |
| 2xkrA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.61 | 45.0 | 2.62e-01 | 96.8% | 75.9% |
| 4b3lA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.59 | 45.0 | 2.58e-01 | 96.8% | 26.2% |
| 3a5yA00 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.57 | 47.0 | 2.79e-01 | 100.0% | 96.6% |
| 3b34A05 | 1.25.50.10 | Mainly Alpha › Alpha Horseshoe › Zincin-like fold › Peptidase M1, alanyl aminopeptidase, C-terminal domain | 0.57 | 42.0 | 2.52e-01 | 100.0% | 15.1% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3403263 | 101.1.2.477 ↗ | alpha arrays › HTH › HTH › winged helix domain › MADF_DNA_bdg | 0.67 | 55.0 | 4.09e-01 | 100.0% | 34.4% |
| 3699640 | 3142.1.1.0 ↗ | alpha arrays › a domain of protein A6KY75 › a domain of protein A6KY75 › a domain of protein A6KY75 | 0.67 | 54.0 | 3.43e-01 | 100.0% | 31.9% |
| 3818755 | 101.1.1.138 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › GeBP-like_DBD | 0.67 | 52.0 | 3.92e-01 | 100.0% | 38.9% |
| 3717089 | 3142.1.1.0 ↗ | alpha arrays › a domain of protein A6KY75 › a domain of protein A6KY75 › a domain of protein A6KY75 | 0.66 | 53.0 | 4.15e-01 | 100.0% | 75.0% |
| 3921890 | 603.2.1.1 ↗ | alpha bundles › STAT-like › STAT › STAT › STAT_alpha | 0.63 | 49.0 | 3.27e-01 | 93.5% | 68.3% |