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js4906-26-2_S25_scaffold_55_prodigal-single.1__X__X__00171
Bact-Virjs4906-26-2_S25_scaffold_55_prodigal-single.1__X__X__00171
Identity
- Kingdom:
- phage
Quality
69.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-75
D2
medium
residues 76-199
Domain cluster:
rep: SRR1747040_scaffold_2_curated_closed_complete_prodigal-single.1__X__X__00044__D53-166
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13306.13 best | LRR_5 | 67.3 | 1.70e-18 | 90.3% | 63.8% |
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4fs7A00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.84 | 69.0 | 4.70e-01 | 84.7% | 34.2% |
| 4gt6A00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.84 | 70.0 | 4.76e-01 | 91.9% | 28.2% |
| 4h09D00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.83 | 69.0 | 4.76e-01 | 87.1% | 39.3% |
| 4ojuA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.80 | 65.0 | 6.15e-01 | 83.1% | 74.6% |
| 3sb4A02 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.80 | 63.0 | 5.79e-01 | 83.1% | 65.4% |
| 4cp6A00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.80 | 68.0 | 4.61e-01 | 89.5% | 31.6% |
| 4fd0A02 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.78 | 69.0 | 5.06e-01 | 92.7% | 51.3% |
| 4bv4R00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.75 | 61.0 | 4.15e-01 | 87.1% | 36.1% |
| 1xwdC00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.75 | 61.0 | 4.87e-01 | 87.1% | 64.9% |
| 3sb4A01 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.73 | 58.0 | 5.12e-01 | 83.9% | 79.0% |
| 4u7lA01 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.72 | 59.0 | 4.35e-01 | 87.1% | 47.2% |
| 2z80B00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.71 | 58.0 | 4.25e-01 | 87.1% | 41.6% |
| 1w8aA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.70 | 61.0 | 5.30e-01 | 95.2% | 83.1% |
| 1xkuA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.69 | 58.0 | 4.32e-01 | 92.7% | 36.4% |
| 3zyiA01 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.69 | 57.0 | 4.23e-01 | 87.9% | 46.5% |
| 2xotB01 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.69 | 57.0 | 4.53e-01 | 88.7% | 68.0% |
| 8axjA01 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.68 | 54.0 | 5.22e-01 | 83.1% | 81.0% |
| 7ax1A01 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.66 | 52.0 | 5.02e-01 | 86.3% | 73.2% |
| 2xtwD00 | 2.160.20.80 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA | 0.66 | 54.0 | 4.52e-01 | 87.1% | 79.8% |
| 4xsqB00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.65 | 59.0 | 5.19e-01 | 98.4% | 98.9% |
| 4nkhE00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.65 | 55.0 | 4.41e-01 | 92.7% | 46.9% |
| 3ogkH02 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.64 | 56.0 | 3.76e-01 | 100.0% | 46.4% |
| 2z7xB00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.64 | 53.0 | 3.48e-01 | 89.5% | 32.1% |
| 3bz5A01 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.62 | 55.0 | 3.91e-01 | 96.0% | 36.8% |
| 3gozA01 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.60 | 52.0 | 4.02e-01 | 100.0% | 77.0% |
| 4lxrA02 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.59 | 48.0 | 4.25e-01 | 88.7% | 61.0% |
| 4nzrM02 | 2.160.20.180 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.57 | 45.0 | 3.95e-01 | 83.1% | 56.0% |
ECOD (48)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1281087 | 207.1.1.21 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5 | 0.84 | 69.0 | 4.70e-01 | 84.7% | 34.2% |
| 2576217 | 207.1.1.21 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5 | 0.83 | 70.0 | 5.66e-01 | 87.1% | 69.6% |
| 1295939 | 207.1.1.21 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5 | 0.83 | 69.0 | 4.76e-01 | 87.1% | 39.3% |
| 5033803 | 207.1.1.21 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5 | 0.81 | 72.0 | 5.76e-01 | 92.7% | 68.2% |
| 1297113 | 207.1.1.21 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5 | 0.80 | 65.0 | 6.13e-01 | 83.1% | 74.1% |
| 1281127 | 207.1.1.21 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5 | 0.80 | 67.0 | 5.95e-01 | 87.1% | 80.5% |
| 1501314 | 207.1.1.21 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5 | 0.80 | 68.0 | 4.61e-01 | 89.5% | 31.6% |
| 4148563 | 207.1.1.21 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5 | 0.79 | 72.0 | 4.67e-01 | 95.2% | 69.1% |
| 1600195 | 207.1.1.21 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5 | 0.79 | 70.0 | 5.76e-01 | 93.5% | 72.6% |
| 3613454 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.77 | 60.0 | 4.70e-01 | 83.9% | 40.8% |
| 1122389 | 207.1.1.130 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_8 | 0.75 | 61.0 | 4.15e-01 | 87.1% | 36.1% |
| None | — | 0.74 | 59.0 | 4.48e-01 | 83.9% | 38.5% | |
| 3879930 | 207.1.1.140 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRRNT, LRR_8 | 0.73 | 63.0 | 4.85e-01 | 91.1% | 53.2% |
| 3501488 | 207.1.1.130 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_8 | 0.73 | 60.0 | 3.90e-01 | 87.9% | 27.1% |
| 3753491 | 207.1.1.140 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRRNT, LRR_8 | 0.72 | 60.0 | 4.78e-01 | 88.7% | 56.7% |
| 4946518 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.71 | 61.0 | 4.99e-01 | 93.5% | 54.8% |
| 3608354 | 207.1.1.252 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_6, LRR_At5g56370 | 0.70 | 56.0 | 4.60e-01 | 84.7% | 56.0% |
| 3406665 | 207.1.1.56 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_4,LRR_6,LRR_8 | 0.70 | 57.0 | 3.71e-01 | 87.1% | 27.5% |
| 3895779 | 207.1.1.141 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5, LRR_8 | 0.70 | 59.0 | 4.61e-01 | 90.3% | 53.8% |
| 3325571 | 207.1.1.43 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_3 | 0.70 | 61.0 | 4.10e-01 | 95.2% | 30.7% |
| 3530728 | 207.1.1.148 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_4, LRR_9 | 0.69 | 56.0 | 4.11e-01 | 84.7% | 38.7% |
| 4863574 | 207.1.1.50 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_4,LRR_6 | 0.69 | 53.0 | 5.62e-01 | 88.7% | 91.0% |
| 3779005 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.69 | 56.0 | 3.58e-01 | 85.5% | 22.2% |
| 3524120 | 207.1.1.55 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 | 0.69 | 58.0 | 4.48e-01 | 90.3% | 52.6% |
| 3995386 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.69 | 55.0 | 4.29e-01 | 90.3% | 40.4% |
| 3309702 | 207.1.1.43 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_3 | 0.68 | 57.0 | 3.70e-01 | 90.3% | 23.0% |
| 3468507 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.68 | 52.0 | 4.17e-01 | 81.5% | 51.8% |
| 3920962 | 207.1.1.55 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 | 0.67 | 55.0 | 3.99e-01 | 87.9% | 46.3% |
| 3342447 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 62.0 | 3.70e-01 | 100.0% | 25.8% |
| 3828210 | 207.1.1.43 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_3 | 0.67 | 57.0 | 4.55e-01 | 91.9% | 48.2% |
| None | — | 0.67 | 59.0 | 4.05e-01 | 99.2% | 53.8% | |
| 3261076 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.66 | 57.0 | 3.82e-01 | 93.5% | 36.5% |
| 3780934 | 207.1.1.144 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_4 | 0.65 | 53.0 | 4.54e-01 | 94.4% | 53.7% |
| 3805601 | 207.1.1.97 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_RPS2 | 0.65 | 59.0 | 3.85e-01 | 98.4% | 33.6% |
| 3306797 | 207.1.1.97 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_RPS2 | 0.64 | 55.0 | 3.46e-01 | 92.7% | 29.2% |
| 3298349 | 207.1.1.97 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_RPS2 | 0.64 | 56.0 | 4.40e-01 | 96.0% | 71.3% |
| 3341461 | 207.1.1.171 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_RPS2, LRR_R13L1-DRL21 | 0.64 | 54.0 | 3.92e-01 | 93.5% | 46.4% |
| 3408103 | 207.1.1.24 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_8 | 0.64 | 51.0 | 3.68e-01 | 87.1% | 34.3% |
| 3741384 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.63 | 56.0 | 4.14e-01 | 100.0% | 74.4% |
| 3392023 | 207.1.1.5 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › Recep_L_domain | 0.63 | 53.0 | 5.04e-01 | 92.7% | 84.7% |
| 3441692 | 207.1.1.97 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_RPS2 | 0.62 | 54.0 | 4.02e-01 | 95.2% | 51.2% |
| 3512476 | 207.1.1.20 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_4 | 0.62 | 49.0 | 4.68e-01 | 85.5% | 84.0% |
| 3704875 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.62 | 56.0 | 5.06e-01 | 100.0% | 89.4% |
| 3309124 | 207.1.1.43 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_3 | 0.61 | 55.0 | 4.56e-01 | 99.2% | 91.4% |
| 3826283 | 207.1.1.43 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_3 | 0.60 | 54.0 | 4.34e-01 | 99.2% | 84.5% |
| 3201342 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.60 | 51.0 | 4.93e-01 | 92.7% | 85.0% |
| 3311308 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.59 | 53.0 | 3.71e-01 | 100.0% | 60.7% |
| 3276920 | 207.1.1.12 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP | 0.59 | 52.0 | 3.28e-01 | 100.0% | 29.8% |