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js4906-26-2_S25_scaffold_55_prodigal-single.1__X__X__00192
Bact-Virjs4906-26-2_S25_scaffold_55_prodigal-single.1__X__X__00192
Identity
- Kingdom:
- phage
Quality
35.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 880-1000
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3m1uA01 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.70 | 60.0 | 5.28e-01 | 100.0% | 63.7% |
| 3hg9A01 | 3.30.1300.90 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › PilM protein, N-terminal domain | 0.54 | 33.0 | 3.96e-01 | 97.5% | 94.8% |
| 1v5rA00 | 3.30.920.20 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Gas2-like domain | 0.51 | 25.0 | 2.76e-01 | 78.5% | 54.6% |
| 3aeiA00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.51 | 26.0 | 2.94e-01 | 80.2% | 62.8% |
| 4ci8A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 44.0 | 3.30e-01 | 97.5% | 78.6% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3999534 | 391.1.2.9 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › Fn1_2 | 0.63 | 21.0 | 3.39e-01 | 89.3% | 82.5% |
| 3585186 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.58 | 19.0 | 3.07e-01 | 76.9% | 85.7% |
| 3231089 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.52 | 20.0 | 2.91e-01 | 87.6% | 87.5% |
| 3506058 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.52 | 28.0 | 3.02e-01 | 88.4% | 61.0% |
| 3446439 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.52 | 42.0 | 3.17e-01 | 90.1% | 63.1% |
D2
medium
residues 605-658
D3
medium
residues 1651-1717