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js4906-29-5_S40_scaffold_13_prodigal-single.1__X__X__00003

Bact-Vir

js4906-29-5_S40_scaffold_13_prodigal-single.1__X__X__00003

Identity

Kingdom:
phage

Quality

78.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 19-148
PDB
Domain cluster: representative
CATH (45)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wi9A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 37.0 5.46e-01 79.2% 100.0%
2b0lC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 49.0 5.68e-01 90.0% 88.3%
2d1hB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 49.0 5.54e-01 93.8% 84.7%
3g3zA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 39.0 5.39e-01 80.8% 100.0%
5bpdD01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 43.0 5.53e-01 89.2% 97.3%
2xubA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 45.0 5.68e-01 90.8% 100.0%
2jt1A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 41.0 5.46e-01 81.5% 100.0%
2fe3B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 48.0 5.81e-01 88.5% 100.0%
4b8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 45.0 4.43e-01 86.2% 56.4%
3cjnA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 44.0 4.21e-01 86.2% 52.1%
7l1iA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 44.0 4.21e-01 86.2% 51.0%
1ulyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 46.0 5.49e-01 91.5% 92.1%
1mzbA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 45.0 5.59e-01 86.9% 98.8%
4yifF00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 42.0 4.28e-01 87.7% 57.7%
2qvoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 43.0 5.18e-01 85.4% 88.5%
3eyyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 45.0 5.57e-01 89.2% 100.0%
3oopA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 43.0 4.29e-01 86.9% 57.5%
5jbrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 46.0 5.65e-01 92.3% 98.8%
2obpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 43.0 5.34e-01 86.2% 96.3%
1z6tA04 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 46.0 5.47e-01 91.5% 97.6%
1lj9B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 45.0 4.38e-01 86.9% 57.7%
4xrfA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 44.0 4.28e-01 87.7% 56.3%
4g9yA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 44.0 4.35e-01 86.2% 58.8%
2gxgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 42.0 4.17e-01 86.2% 55.0%
3bj6B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 45.0 4.24e-01 88.5% 54.3%
4rayA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 44.0 5.34e-01 89.2% 96.5%
2xigA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 48.0 5.66e-01 93.1% 100.0%
2qwwC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 43.0 4.23e-01 90.0% 57.2%
4nb5B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 44.0 5.39e-01 90.8% 97.6%
1ku9B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 45.0 5.38e-01 92.3% 98.9%
2fbhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 44.0 4.38e-01 90.0% 62.0%
6uvuA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 46.0 5.12e-01 80.8% 87.5%
2nyxB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 45.0 4.42e-01 90.8% 62.0%
3e6mA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 41.0 3.99e-01 87.7% 54.1%
2fbiA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 43.0 4.28e-01 90.0% 61.8%
5nl9A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 41.0 5.01e-01 86.9% 96.4%
2rdpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 42.0 4.15e-01 87.7% 59.3%
2ethA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 47.0 4.56e-01 86.2% 68.1%
7dvrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 44.0 4.34e-01 87.7% 63.8%
1hkqA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 53.0 5.40e-01 91.5% 88.8%
3r0aA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 47.0 4.86e-01 90.0% 80.8%
3m8eA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 42.0 4.71e-01 91.5% 85.1%
8amzO01 1.25.40.570 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.62 47.0 3.42e-01 78.5% 49.7%
6j0eB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 48.0 5.10e-01 85.4% 98.3%
8amzP01 1.25.40.570 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.56 42.0 3.02e-01 77.7% 45.1%
ECOD (47)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4995778 101.1.2.368 alpha arrays › HTH › HTH › winged helix domain › HTH_36 0.84 54.0 6.71e-01 93.1% 100.0%
5028179 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.81 50.0 5.53e-01 86.2% 76.2%
5072812 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.80 50.0 6.13e-01 91.5% 96.5%
3946326 101.1.2.242 alpha arrays › HTH › HTH › winged helix domain › RepL 0.80 56.0 5.50e-01 96.2% 67.1%
3838521 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 53.0 6.02e-01 90.8% 88.0%
4943729 101.1.2.878 alpha arrays › HTH › HTH › winged helix domain › CTP-dep_RFKase 0.79 48.0 5.62e-01 87.7% 84.2%
4975425 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.78 48.0 5.74e-01 85.4% 88.9%
4937983 101.1.2.139 alpha arrays › HTH › HTH › winged helix domain › HTH_23 0.78 41.0 4.61e-01 82.3% 64.8%
4980008 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.78 41.0 5.32e-01 84.6% 89.3%
None 0.78 49.0 5.84e-01 90.0% 92.2%
4962776 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.76 47.0 5.21e-01 91.5% 76.2%
5066482 101.1.2.751 alpha arrays › HTH › HTH › winged helix domain › DUF6293_C 0.76 41.0 4.83e-01 84.6% 75.6%
4937866 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 42.0 5.13e-01 83.1% 83.5%
4965712 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.76 43.0 4.98e-01 86.2% 76.8%
4356453 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.75 49.0 5.68e-01 92.3% 89.5%
4966804 101.1.2.530 alpha arrays › HTH › HTH › winged helix domain › HVO_A0114 0.75 41.0 5.04e-01 83.8% 82.4%
5069901 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 42.0 4.97e-01 83.1% 80.0%
3282985 101.1.2.508 alpha arrays › HTH › HTH › winged helix domain › PF25872 0.74 45.0 5.48e-01 91.5% 92.9%
4998856 101.1.2.785 alpha arrays › HTH › HTH › winged helix domain › HTH_13 0.74 46.0 5.60e-01 91.5% 95.3%
1147772 101.1.2.90 alpha arrays › HTH › HTH › winged helix domain › HTH_9 0.74 47.0 5.71e-01 92.3% 98.8%
167429 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.74 44.0 4.21e-01 86.2% 52.1%
3287283 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 45.0 4.88e-01 90.8% 72.7%
4950894 101.1.1.195 alpha arrays › HTH › HTH › Three-helical HTH › HTH_5 0.73 44.0 3.82e-01 92.3% 39.5%
5076263 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 44.0 5.32e-01 87.7% 92.9%
4974684 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 41.0 4.67e-01 85.4% 73.0%
2725 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 43.0 5.34e-01 86.2% 96.3%
3590570 101.1.2.368 alpha arrays › HTH › HTH › winged helix domain › HTH_36 0.71 55.0 5.68e-01 98.5% 83.2%
5036041 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 46.0 5.35e-01 90.0% 89.5%
4993306 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 44.0 5.13e-01 86.2% 88.9%
5058409 101.1.2.110 alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.70 44.0 5.31e-01 88.5% 96.5%
5037176 101.1.2.92 alpha arrays › HTH › HTH › winged helix domain › HTH_11 0.69 45.0 5.26e-01 89.2% 94.4%
4973726 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 43.0 4.60e-01 87.7% 71.3%
4998981 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 41.0 4.98e-01 87.7% 95.3%
5077585 101.1.2.110 alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.66 43.0 5.13e-01 95.4% 96.7%
4927802 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 48.0 4.47e-01 76.9% 75.0%
5018467 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 42.0 4.89e-01 94.6% 96.8%
4992848 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 39.0 4.15e-01 93.8% 73.0%
5073662 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.59 53.0 4.46e-01 96.2% 83.6%
4979439 101.1.2.44 alpha arrays › HTH › HTH › winged helix domain › Ribosomal_S25 0.59 37.0 4.58e-01 91.5% 100.0%
5031317 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 42.0 4.33e-01 98.5% 80.0%
5047052 101.1.2.673 alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N 0.58 49.0 4.50e-01 90.0% 80.4%
5074186 101.1.2.44 alpha arrays › HTH › HTH › winged helix domain › Ribosomal_S25 0.57 40.0 4.46e-01 70.8% 98.0%
4964823 101.1.2.929 alpha arrays › HTH › HTH › winged helix domain › HVO_2833_C 0.55 46.0 3.84e-01 90.8% 66.1%
3689581 101.1.2.517 alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc82, HTH_9, POLR3C_WHD 0.54 50.0 3.24e-01 98.5% 97.2%
4935553 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.53 45.0 4.21e-01 90.8% 91.9%
4963345 101.1.2.928 alpha arrays › HTH › HTH › winged helix domain › HTH_Cmi2_C 0.52 44.0 4.17e-01 90.8% 91.6%
3601429 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 38.0 4.13e-01 93.1% 92.7%
D2 high residues 163-242
PDB
Domain cluster: representative
CATH (72)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7jgsG02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 64.0 5.97e-01 91.3% 78.6%
5trdA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 57.0 5.64e-01 91.3% 77.4%
3jckC00 1.25.40.570 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.74 57.0 3.64e-01 95.0% 17.5%
4y66F01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 56.0 6.04e-01 91.3% 97.0%
5jbrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 59.0 5.75e-01 98.8% 81.4%
5xnsC00 1.10.10.580 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E 0.73 59.0 6.27e-01 95.0% 100.0%
1u5tA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 58.0 6.02e-01 93.8% 93.3%
5eriA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 59.0 4.69e-01 98.8% 45.8%
1yyvB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 58.0 5.13e-01 97.5% 61.6%
3l09A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 57.0 5.61e-01 92.5% 82.1%
1s3jA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 53.0 5.85e-01 95.0% 100.0%
2mh2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 53.0 5.79e-01 91.3% 100.0%
4nb5B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 59.0 5.79e-01 98.8% 84.7%
1p4xA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 58.0 4.94e-01 97.5% 55.9%
3cuqA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 54.0 5.46e-01 100.0% 81.2%
2b0lC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 58.0 5.58e-01 100.0% 77.7%
1p6rA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 55.0 5.54e-01 100.0% 82.9%
2fe3B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 63.0 6.22e-01 100.0% 92.9%
4xrfA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 55.0 4.54e-01 98.8% 47.9%
6pcoC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 56.0 4.75e-01 98.8% 53.0%
6qpqB00 1.10.10.580 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E 0.70 59.0 5.94e-01 92.5% 91.4%
2ethA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 56.0 4.59e-01 100.0% 48.9%
2xubA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 54.0 5.52e-01 100.0% 85.9%
1fokA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 56.0 5.50e-01 95.0% 80.5%
1z7uB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 56.0 5.05e-01 100.0% 63.6%
3cuoD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 53.0 5.06e-01 100.0% 70.2%
1ku9B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 56.0 5.50e-01 100.0% 81.6%
3cjnA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 54.0 4.45e-01 98.8% 46.6%
2gxgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 55.0 4.50e-01 98.8% 48.6%
3zcoA00 1.10.10.2450 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.69 61.0 5.24e-01 100.0% 82.7%
3m8eA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 56.0 5.18e-01 100.0% 70.3%
5e1wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 55.0 4.28e-01 100.0% 41.1%
2rdpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 53.0 4.37e-01 98.8% 47.1%
3bz6A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 55.0 5.59e-01 95.0% 88.5%
4rayA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 58.0 5.72e-01 100.0% 88.2%
7dvrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 54.0 4.55e-01 100.0% 50.4%
3mwmA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 54.0 5.62e-01 93.8% 93.3%
1u5tA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 51.0 5.40e-01 100.0% 91.5%
2xigA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 60.0 5.78e-01 100.0% 86.8%
1tbxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 51.0 4.97e-01 93.8% 72.2%
6j0eB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 55.0 4.85e-01 100.0% 60.7%
1sd4A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 51.0 5.53e-01 95.0% 100.0%
6abqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 56.0 5.04e-01 93.8% 67.0%
2mlgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 51.0 5.20e-01 92.5% 84.4%
2jscB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 51.0 5.11e-01 100.0% 81.2%
2f2eA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 54.0 5.22e-01 100.0% 76.9%
1ub9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 55.0 5.11e-01 97.5% 72.0%
3htuA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 54.0 5.60e-01 91.3% 100.0%
8amzP01 1.25.40.570 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.66 57.0 3.67e-01 95.0% 44.5%
2fbhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 54.0 4.51e-01 98.8% 51.8%
2xzn800 3.30.63.20 Alpha Beta › 2-Layer Sandwich › Guanylate Kinase phosphate binding domain › 0.66 49.0 4.74e-01 93.8% 68.8%
3bz6A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 59.0 5.72e-01 100.0% 92.2%
2co5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 52.0 4.97e-01 93.8% 73.9%
2l02A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 51.0 5.10e-01 95.0% 81.7%
5hs7B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 54.0 5.11e-01 100.0% 74.5%
5iceA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 53.0 4.92e-01 97.5% 70.3%
4gyiA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 54.0 5.20e-01 100.0% 78.5%
1d8jA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 54.0 5.42e-01 93.8% 91.4%
4hqeA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 55.0 5.08e-01 100.0% 72.4%
1xb4B02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 53.0 5.52e-01 93.8% 97.3%
1jgsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 52.0 4.36e-01 98.8% 50.7%
3eyyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 58.0 5.76e-01 100.0% 95.1%
2oqgB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 48.0 4.45e-01 100.0% 61.1%
1u5tB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 51.0 5.38e-01 95.0% 100.0%
5dymA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 51.0 4.84e-01 92.5% 72.9%
7ewfB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 53.0 5.49e-01 95.0% 98.7%
3l7wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 49.0 4.54e-01 92.5% 68.6%
1whrA00 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.61 52.0 4.53e-01 96.2% 62.9%
4izzB03 1.10.10.1670 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › HetR, flap domain 0.58 47.0 4.29e-01 92.5% 98.3%
1bxoA02 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.55 39.0 3.19e-01 75.0% 96.7%
4pcaB00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.50 40.0 3.02e-01 90.0% 34.9%
3kxyJ00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.50 34.0 3.02e-01 72.5% 67.4%
ECOD (99)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3782579 101.1.2.82 alpha arrays › HTH › HTH › winged helix domain › TBPIP 0.76 58.0 4.87e-01 93.8% 48.1%
5072417 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 61.0 5.29e-01 91.3% 57.5%
5029321 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 59.0 4.54e-01 100.0% 38.8%
4025539 101.1.2.22 alpha arrays › HTH › HTH › winged helix domain › PCI 0.76 63.0 6.50e-01 95.0% 96.0%
3926383 101.1.2.68 alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 0.76 65.0 5.31e-01 95.0% 62.8%
3610460 101.1.2.22 alpha arrays › HTH › HTH › winged helix domain › PCI 0.75 62.0 6.21e-01 95.0% 90.0%
3479849 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 62.0 6.20e-01 95.0% 90.0%
4029108 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 59.0 5.36e-01 100.0% 63.3%
5029922 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.74 60.0 5.93e-01 97.5% 82.4%
5073308 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 59.0 5.94e-01 93.8% 85.0%
3513904 101.1.2.22 alpha arrays › HTH › HTH › winged helix domain › PCI 0.74 61.0 6.17e-01 95.0% 90.0%
4407982 101.1.2.22 alpha arrays › HTH › HTH › winged helix domain › PCI 0.74 65.0 6.50e-01 93.8% 93.8%
3170419 101.1.2.82 alpha arrays › HTH › HTH › winged helix domain › TBPIP 0.74 56.0 4.54e-01 93.8% 43.3%
4028116 101.1.2.82 alpha arrays › HTH › HTH › winged helix domain › TBPIP 0.74 56.0 5.57e-01 93.8% 77.6%
5078802 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 59.0 6.25e-01 92.5% 98.6%
3965014 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 65.0 5.72e-01 100.0% 67.8%
3296862 101.1.2.22 alpha arrays › HTH › HTH › winged helix domain › PCI 0.73 58.0 5.99e-01 93.8% 92.0%
3598016 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 59.0 5.91e-01 93.8% 87.5%
4944350 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 56.0 5.60e-01 97.5% 79.5%
5040897 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.73 56.0 5.76e-01 96.2% 86.7%
2070315 101.1.2.82 alpha arrays › HTH › HTH › winged helix domain › TBPIP 0.72 57.0 6.00e-01 93.8% 94.4%
4956545 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 57.0 6.07e-01 91.3% 95.7%
4348647 101.1.2.39 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpA 0.72 55.0 5.77e-01 93.8% 92.9%
4946714 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.72 62.0 5.94e-01 93.8% 86.7%
4388536 101.1.2.39 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpA 0.72 55.0 5.96e-01 93.8% 100.0%
5049010 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 51.0 5.80e-01 91.3% 100.0%
3700393 101.1.2.82 alpha arrays › HTH › HTH › winged helix domain › TBPIP 0.72 54.0 3.98e-01 93.8% 30.2%
5051541 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.72 57.0 5.40e-01 100.0% 71.6%
4316250 6102.1.1.1 alpha arrays › N-terminal domain of segregation and condensation protein A, ScpA › N-terminal domain of segregation and condensation protein A, ScpA › N-terminal domain of segregation and condensation protein A, ScpA › SMC_ScpA 0.72 54.0 3.94e-01 93.8% 29.5%
4606139 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 62.0 6.26e-01 95.0% 95.0%
4247304 101.1.2.39 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpA 0.71 54.0 5.83e-01 93.8% 100.0%
3595354 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 52.0 4.33e-01 90.0% 44.3%
3794506 101.1.2.82 alpha arrays › HTH › HTH › winged helix domain › TBPIP 0.71 56.0 4.12e-01 93.8% 33.2%
3942501 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 60.0 5.85e-01 100.0% 84.4%
5000704 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 58.0 5.64e-01 93.8% 81.1%
3600734 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 58.0 5.39e-01 100.0% 72.0%
4968342 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 55.0 5.09e-01 100.0% 65.7%
3962193 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 55.0 5.78e-01 93.8% 97.1%
4980073 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 53.0 5.73e-01 90.0% 98.5%
5031186 101.1.2.39 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpA 0.70 56.0 5.79e-01 96.2% 93.3%
3957409 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 56.0 5.21e-01 100.0% 70.0%
4940464 101.1.2.26 alpha arrays › HTH › HTH › winged helix domain › HxlR 0.70 59.0 5.25e-01 100.0% 66.4%
4937110 101.1.2.128 alpha arrays › HTH › HTH › winged helix domain › DUF2582 0.70 54.0 5.61e-01 95.0% 89.3%
3285340 101.1.2.26 alpha arrays › HTH › HTH › winged helix domain › HxlR 0.69 56.0 4.44e-01 97.5% 43.8%
3898882 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 57.0 5.02e-01 96.2% 61.7%
4979663 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 55.0 5.54e-01 95.0% 86.3%
3462675 101.1.2.65 alpha arrays › HTH › HTH › winged helix domain › Rad21_Rec8 0.69 58.0 5.79e-01 96.2% 90.4%
3738688 101.1.2.68 alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 0.69 55.0 5.70e-01 97.5% 94.7%
3785110 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 57.0 4.80e-01 91.3% 75.6%
3500170 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 57.0 5.48e-01 100.0% 81.1%
4424248 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 58.0 5.86e-01 100.0% 96.2%
4938741 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.68 62.0 5.08e-01 100.0% 56.4%
3405208 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 57.0 5.73e-01 92.5% 95.0%
4955292 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 54.0 4.47e-01 96.2% 48.9%
3167236 148.1.3.31 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM4_WHD 0.68 56.0 5.53e-01 93.8% 85.9%
4927470 101.1.2.39 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpA 0.68 53.0 5.48e-01 95.0% 89.3%
3742570 101.1.2.65 alpha arrays › HTH › HTH › winged helix domain › Rad21_Rec8 0.67 56.0 5.23e-01 95.0% 73.0%
4927192 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 52.0 4.95e-01 93.8% 70.5%
4347454 101.1.2.39 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpA 0.67 52.0 5.52e-01 90.0% 98.6%
1284299 101.1.2.25 alpha arrays › HTH › HTH › winged helix domain › FUR 0.67 61.0 4.87e-01 100.0% 51.6%
3630104 192.24.1.6 alpha bundles › Long alpha-hairpin › RPC62 helical hairpin domain › RPC62 helical hairpin domain › RNA_pol_Rpc82, HTH_9, POLR3C_WHD 0.67 59.0 3.82e-01 100.0% 22.6%
5000260 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 59.0 4.63e-01 100.0% 48.1%
4600617 101.1.2.25 alpha arrays › HTH › HTH › winged helix domain › FUR 0.66 60.0 4.84e-01 100.0% 54.0%
3960773 101.1.2.508 alpha arrays › HTH › HTH › winged helix domain › PF25872 0.66 54.0 4.07e-01 100.0% 35.6%
5079762 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.66 51.0 5.07e-01 95.0% 80.0%
4149931 101.1.2.39 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpA 0.66 50.0 5.26e-01 93.8% 92.9%
3223457 101.1.2.661 alpha arrays › HTH › HTH › winged helix domain › HTH_9, POLR3C_WHD 0.66 59.0 3.98e-01 100.0% 27.9%
3239585 101.1.2.65 alpha arrays › HTH › HTH › winged helix domain › Rad21_Rec8 0.66 52.0 5.53e-01 93.8% 98.6%
3638956 101.1.2.309 alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.66 53.0 4.36e-01 88.7% 57.3%
3950166 101.1.2.39 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpA 0.66 53.0 5.17e-01 92.5% 81.8%
5013996 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 54.0 5.55e-01 96.2% 96.0%
4651301 101.1.2.88 alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.65 53.0 4.75e-01 97.5% 63.5%
3583168 101.1.2.490 alpha arrays › HTH › HTH › winged helix domain › WHD_CHMP7 0.65 54.0 4.90e-01 95.0% 68.2%
3169535 101.1.2.207 alpha arrays › HTH › HTH › winged helix domain › TFC3_eWH 0.65 57.0 5.32e-01 100.0% 81.0%
3585702 101.1.2.90 alpha arrays › HTH › HTH › winged helix domain › HTH_9 0.65 53.0 5.20e-01 100.0% 83.5%
4026719 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 54.0 4.67e-01 93.8% 60.0%
4399101 101.1.2.88 alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.64 52.0 4.78e-01 96.2% 67.3%
4934328 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 50.0 5.29e-01 93.8% 95.7%
4886685 101.1.2.39 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpA 0.63 49.0 3.66e-01 92.5% 31.4%
3254058 101.1.2.151 alpha arrays › HTH › HTH › winged helix domain › COR 0.63 50.0 4.95e-01 93.8% 82.4%
4980177 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.63 48.0 4.23e-01 92.5% 55.0%
3504793 101.1.2.490 alpha arrays › HTH › HTH › winged helix domain › WHD_CHMP7 0.63 53.0 5.33e-01 95.0% 98.8%
3390936 101.1.2.267 alpha arrays › HTH › HTH › winged helix domain › Nse4_C 0.63 50.0 4.72e-01 96.2% 72.0%
3989947 6102.1.1.1 alpha arrays › N-terminal domain of segregation and condensation protein A, ScpA › N-terminal domain of segregation and condensation protein A, ScpA › N-terminal domain of segregation and condensation protein A, ScpA › SMC_ScpA 0.63 49.0 3.56e-01 92.5% 30.0%
3441807 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.62 53.0 5.25e-01 96.2% 92.9%
3716725 101.1.2.68 alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 0.62 52.0 4.22e-01 95.0% 70.3%
3611229 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 52.0 3.67e-01 93.8% 30.0%
4992272 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 52.0 4.54e-01 92.5% 65.8%
3840297 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 55.0 4.09e-01 100.0% 88.3%
3829267 101.1.2.88 alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.61 49.0 4.37e-01 96.2% 60.0%
5075195 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 48.0 4.32e-01 100.0% 60.0%
5028861 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 40.0 4.59e-01 80.0% 100.0%
3718665 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 50.0 4.92e-01 93.8% 89.4%
5030899 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 47.0 4.92e-01 98.8% 100.0%
5045969 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.60 49.0 4.66e-01 100.0% 76.8%
3986740 101.1.2.380 alpha arrays › HTH › HTH › winged helix domain › TraI_hel_assoc_N 0.59 51.0 3.41e-01 98.8% 82.6%
5040556 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 53.0 4.62e-01 100.0% 66.7%
5065249 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 47.0 4.67e-01 92.5% 88.2%
3701534 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.50 40.0 3.61e-01 88.7% 70.4%
D3 high residues 247-341
PDB
Domain cluster: representative
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3uk6A02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.69 55.0 5.88e-01 93.7% 98.8%
3d8bB02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.68 53.0 5.67e-01 82.1% 100.0%
7e4nA01 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.65 57.0 4.16e-01 100.0% 65.8%
2q7rB00 1.20.120.550 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Membrane associated eicosanoid/glutathione metabolism-like domain 0.60 47.0 4.10e-01 85.3% 81.0%
4wk5A00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.59 43.0 3.27e-01 80.0% 70.7%
3lomA00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.58 51.0 3.71e-01 100.0% 71.2%
4qnsA00 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.57 40.0 3.86e-01 71.6% 77.4%
3nf2A00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.57 47.0 3.29e-01 92.6% 59.2%
1xwjA01 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.57 39.0 3.59e-01 71.6% 70.0%
3aqbB00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.57 49.0 3.47e-01 98.9% 57.9%
3fd0A01 3.90.1150.60 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Methioning gamme-lyase, C-terminal domain 0.57 40.0 3.20e-01 73.7% 71.5%
3c02A00 1.20.1080.10 Mainly Alpha › Up-down Bundle › Glycerol uptake facilitator protein › Glycerol uptake facilitator protein. 0.56 44.0 3.30e-01 85.3% 93.8%
3ay5A01 1.20.1420.10 Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain 0.56 38.0 3.38e-01 87.4% 49.6%
2a2mA00 1.20.910.10 Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like 0.55 45.0 3.45e-01 89.5% 68.4%
2abqA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.53 43.0 3.12e-01 90.5% 57.4%
3ihuA02 1.20.120.530 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like 0.53 41.0 3.67e-01 83.2% 59.7%
1wxqA02 1.10.8.470 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.50 33.0 3.43e-01 84.2% 70.0%
1lyvA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.50 39.0 2.82e-01 84.2% 95.1%
ECOD (29)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3414602 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.75 57.0 6.31e-01 88.4% 100.0%
4471800 148.1.3.237 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PF30483 0.75 55.0 6.16e-01 90.5% 98.7%
3970860 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.70 52.0 5.61e-01 86.3% 95.0%
5077194 191.1.1.0 alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain 0.68 47.0 4.36e-01 71.6% 76.5%
3580587 148.1.3.113 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_TRIP13_C 0.67 56.0 5.64e-01 89.5% 97.9%
3699721 148.1.3.19 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.65 53.0 5.29e-01 89.5% 98.0%
3479807 5079.1.1.0 alpha duplicates or obligate multimers › Magnesium transporter MgtE membrane domain › Magnesium transporter MgtE membrane domain › Magnesium transporter MgtE membrane domain 0.64 44.0 3.48e-01 71.6% 89.0%
3621548 5079.1.1.1 alpha duplicates or obligate multimers › Magnesium transporter MgtE membrane domain › Magnesium transporter MgtE membrane domain › Magnesium transporter MgtE membrane domain › MgtE 0.62 44.0 3.36e-01 72.6% 81.9%
3711195 601.1.1.0 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin 0.60 43.0 4.15e-01 74.7% 90.0%
3207663 605.4.1.4 alpha duplicates or obligate multimers › ROP-like › ROP protein › ROP protein › DUF202 0.60 42.0 4.07e-01 72.6% 87.0%
3834194 5073.1.1.4 alpha bundles › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain M › Cation_ATPase_C,Cation_ATPase_N 0.59 51.0 3.32e-01 100.0% 55.3%
4945084 7014.1.1.1 alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › BacA 0.59 47.0 4.11e-01 87.4% 74.5%
3501721 101.1.10.4 alpha arrays › HTH › HTH › Cyclin-like › RB_B 0.59 51.0 4.24e-01 95.8% 76.4%
3234025 5001.1.1.54 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srbc 0.58 40.0 2.91e-01 71.6% 96.7%
4890446 5050.1.1.9 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.57 39.0 3.39e-01 71.6% 69.0%
3414852 3567.1.1.0 a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer 0.57 46.0 4.15e-01 87.4% 86.2%
5014077 5079.1.1.1 alpha duplicates or obligate multimers › Magnesium transporter MgtE membrane domain › Magnesium transporter MgtE membrane domain › Magnesium transporter MgtE membrane domain › MgtE 0.56 42.0 3.46e-01 78.9% 57.1%
4225884 7014.1.1.1 alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › BacA 0.56 46.0 4.02e-01 92.6% 78.0%
5059346 181.1.1.1 alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N 0.55 38.0 3.92e-01 71.6% 82.4%
4941726 5079.1.1.1 alpha duplicates or obligate multimers › Magnesium transporter MgtE membrane domain › Magnesium transporter MgtE membrane domain › Magnesium transporter MgtE membrane domain › MgtE 0.54 37.0 2.90e-01 70.5% 78.6%
3509112 5053.1.1.1 alpha complex topology › Clc chloride channel › Clc chloride channel › Clc chloride channel › Voltage_CLC 0.54 48.0 3.03e-01 98.9% 66.3%
3995010 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.53 37.0 3.19e-01 71.6% 85.0%
4000733 5050.1.1.1 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr 0.52 42.0 3.80e-01 87.4% 75.4%
3176182 3881.1.1.1 alpha bundles › CNOT9 binding domain CN9BD (DUF3819) › CNOT9 binding domain CN9BD (DUF3819) › CNOT9 binding domain CN9BD (DUF3819) › DUF3819 0.52 42.0 3.30e-01 88.4% 84.8%
3255055 904.1.1.0 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain 0.52 37.0 3.05e-01 72.6% 68.1%
5045324 5082.1.1.1 alpha bundles › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation_efflux 0.52 42.0 3.34e-01 88.4% 94.0%
5030423 3542.1.1.2 alpha arrays › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › SPP 0.51 46.0 3.32e-01 100.0% 88.0%
3626462 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.51 36.0 3.35e-01 71.6% 97.4%
3741742 5076.1.1.1 alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr 0.51 43.0 3.27e-01 100.0% 56.6%