Back to structures

js4906-29-5_S40_scaffold_13_prodigal-single.1__X__X__00150

Bact-Vir

js4906-29-5_S40_scaffold_13_prodigal-single.1__X__X__00150

Identity

Kingdom:
phage

Quality

85.4 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-52
PDB
Domain cluster: representative
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3caxA01 1.20.120.520 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › nmb1532 protein domain like 0.89 63.0 3.98e-01 75.0% 19.4%
3na7A00 1.10.287.1490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.80 57.0 3.57e-01 75.0% 17.7%
4hz4A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.79 54.0 4.11e-01 72.9% 63.4%
6z0fA02 1.25.40.680 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Type VII secretion system EssB, C-terminal-like domain 0.72 65.0 4.38e-01 100.0% 32.5%
4ar9A02 1.10.390.20 Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › 0.67 46.0 3.31e-01 70.8% 25.4%
2vkjA00 1.20.58.2030 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.65 57.0 4.31e-01 100.0% 43.4%
1ku9A02 1.10.287.450 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.64 43.0 4.10e-01 72.9% 98.4%
4fvmA06 1.10.287.690 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain 0.64 46.0 4.68e-01 83.3% 100.0%
3nqwA00 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.61 52.0 3.60e-01 100.0% 43.8%
2ckzA01 6.10.140.870 Special › Helix non-globular › Helix Hairpins › 0.61 48.0 4.86e-01 87.5% 100.0%
2oxlA00 1.20.5.5260 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.58 45.0 4.28e-01 95.8% 75.8%
3qavA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.56 45.0 3.31e-01 93.8% 80.7%
4edgA03 1.20.50.20 Mainly Alpha › Up-down Bundle › Pheromone ER-1 › DnaG, RNA polymerase domain, helical bundle 0.55 47.0 4.41e-01 95.8% 90.0%
1dd9A03 1.20.50.20 Mainly Alpha › Up-down Bundle › Pheromone ER-1 › DnaG, RNA polymerase domain, helical bundle 0.55 44.0 4.21e-01 95.8% 79.7%
2au3A04 1.20.50.30 Mainly Alpha › Up-down Bundle › Pheromone ER-1 › 0.53 42.0 4.08e-01 97.9% 98.2%
ECOD (16)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3490111 385.1.1.10 few secondary structure elements › Cystine-knot cytokines › Cystine-knot cytokines › Cystine-knot cytokines › Noggin 0.87 63.0 4.11e-01 77.1% 21.1%
3838686 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.85 61.0 5.60e-01 75.0% 65.0%
4826095 5067.1.1.5 alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Sterol-sensing 0.82 57.0 4.53e-01 72.9% 40.9%
5083225 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.82 58.0 5.23e-01 75.0% 66.2%
3483364 604.3.1.0 alpha bundles › Spectrin repeat-like › BAG domain › BAG domain 0.79 56.0 4.11e-01 75.0% 29.6%
3628167 375.1.1.233 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_IFT122_C 0.77 67.0 4.19e-01 97.9% 20.8%
3601742 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.75 67.0 4.02e-01 100.0% 18.1%
4029245 109.4.1.72 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Vps16_C 0.74 64.0 3.79e-01 97.9% 17.3%
3560386 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.73 63.0 4.11e-01 100.0% 32.4%
3932497 109.26.1.1 alpha superhelices › Repetitive alpha hairpins › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains › Nucleoporin_C 0.70 63.0 3.61e-01 100.0% 13.6%
3965222 109.4.1.940 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_Slam 0.68 59.0 4.04e-01 93.8% 34.7%
1822966 109.4.1.72 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Vps16_C 0.67 55.0 3.45e-01 97.9% 20.9%
3517258 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.65 57.0 4.12e-01 93.8% 38.3%
3413480 375.1.1.233 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_IFT122_C 0.63 56.0 3.42e-01 100.0% 17.7%
3941020 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.63 51.0 3.45e-01 91.7% 53.9%
3248272 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.60 51.0 3.67e-01 100.0% 38.7%
D2 high residues 67-238
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00004.36 best AAA 95.9 3.90e-27 72.7% 95.4%
CATH (71)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7swlB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.86 78.0 7.88e-01 94.2% 100.0%
7wd3A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.85 77.0 7.80e-01 94.2% 100.0%
3d8bA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.83 77.0 7.21e-01 100.0% 81.2%
6p8vA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.83 79.0 7.30e-01 100.0% 97.2%
6az0A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.83 76.0 7.64e-01 95.3% 97.6%
5e7pA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.83 78.0 7.87e-01 99.4% 100.0%
1g41A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.82 74.0 7.10e-01 94.8% 93.8%
1in4A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.82 65.0 7.03e-01 95.9% 95.3%
1d2nA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.79 74.0 7.42e-01 98.8% 98.8%
7w42B01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.78 75.0 7.47e-01 100.0% 98.3%
5kwaA03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.78 74.0 7.52e-01 100.0% 100.0%
2gnoA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.78 59.0 6.64e-01 88.4% 99.3%
3t15A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.77 64.0 6.76e-01 94.8% 96.1%
3m6aA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.77 62.0 6.65e-01 95.3% 95.3%
1r6bX04 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.76 69.0 6.57e-01 94.8% 90.4%
1sxjA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.74 67.0 6.68e-01 95.3% 93.9%
3pvsB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.74 59.0 6.26e-01 97.1% 94.7%
1um8A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.73 67.0 5.95e-01 95.3% 93.5%
1l8qA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.73 65.0 6.66e-01 99.4% 98.2%
2c9oA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.72 68.0 6.48e-01 100.0% 98.0%
3u61C01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.72 63.0 6.54e-01 94.8% 97.5%
1w5sA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.71 62.0 5.99e-01 91.9% 97.9%
1svmA03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.70 58.0 6.19e-01 91.3% 98.0%
1a5tA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.70 63.0 6.42e-01 94.8% 97.0%
3ewaA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.69 60.0 5.29e-01 92.4% 79.9%
1jr3A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.69 62.0 6.21e-01 95.9% 93.2%
5bq5B00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 63.0 6.13e-01 99.4% 90.4%
3vkhA08 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 61.0 4.73e-01 95.3% 49.3%
4rh7A01 1.20.920.20 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › 0.67 61.0 4.63e-01 97.7% 49.0%
4a8jA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 58.0 4.91e-01 91.9% 69.3%
3vkgA10 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 61.0 5.83e-01 97.1% 93.9%
7jpoE01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.66 57.0 5.92e-01 90.7% 100.0%
5g0xA00 3.40.800.20 Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Histone deacetylase domain 0.66 57.0 4.44e-01 92.4% 69.7%
5ji5A00 3.40.800.20 Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Histone deacetylase domain 0.66 58.0 4.78e-01 94.2% 80.7%
6o1wA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.66 60.0 5.18e-01 97.1% 76.5%
3bs4A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 56.0 4.99e-01 91.9% 82.4%
8dgfB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 59.0 5.70e-01 100.0% 87.4%
6znpA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 58.0 5.38e-01 97.1% 96.2%
3o8lA04 3.40.50.460 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphofructokinase domain 0.63 43.0 4.60e-01 90.7% 80.3%
5agaA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.63 57.0 5.40e-01 97.1% 100.0%
4xqkB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 54.0 4.96e-01 93.0% 98.7%
3kb2A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 49.0 4.96e-01 82.6% 85.4%
3llmA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 57.0 5.20e-01 98.8% 98.2%
2lciA00 3.40.50.11230 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.61 39.0 4.28e-01 78.5% 79.9%
7z67A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 50.0 4.65e-01 90.1% 89.9%
5ailA00 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.58 46.0 4.53e-01 82.6% 96.1%
1rz3A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 49.0 4.85e-01 91.9% 100.0%
2ayiA01 3.40.1830.10 Alpha Beta › 3-Layer(aba) Sandwich › Thermophilic metalloprotease-like › Thermophilic metalloprotease (M29) 0.56 48.0 4.78e-01 91.9% 97.7%
2r47A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.56 42.0 4.63e-01 91.9% 97.8%
5ig2A00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 44.0 3.75e-01 83.7% 91.4%
3gemD00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 43.0 4.05e-01 82.6% 96.3%
4zcfC02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 45.0 4.41e-01 91.3% 80.1%
4icsA01 3.40.1830.10 Alpha Beta › 3-Layer(aba) Sandwich › Thermophilic metalloprotease-like › Thermophilic metalloprotease (M29) 0.54 46.0 4.57e-01 91.9% 94.0%
3hdtA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 42.0 4.31e-01 80.8% 86.9%
4fn4A00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 44.0 3.89e-01 86.6% 97.2%
7exfA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.53 48.0 3.96e-01 98.3% 79.9%
4i6kA00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.53 44.0 3.81e-01 87.8% 97.8%
1uozA01 3.20.20.40 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 1, 4-beta cellobiohydrolase 0.53 48.0 4.02e-01 98.3% 72.0%
1r6uA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.53 45.0 4.01e-01 94.2% 81.8%
2nq5A01 3.20.20.210 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 0.53 47.0 3.62e-01 97.7% 63.0%
5jx5A00 3.20.20.40 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 1, 4-beta cellobiohydrolase 0.52 47.0 3.83e-01 98.3% 68.9%
3a04A01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.52 44.0 3.95e-01 92.4% 80.9%
3q71A00 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.52 42.0 4.03e-01 86.0% 98.0%
1ly1A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 38.0 4.07e-01 76.7% 96.7%
1w6uD00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 44.0 3.79e-01 92.4% 85.1%
3focA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.52 44.0 3.78e-01 94.2% 80.4%
1jcjA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.51 45.0 3.98e-01 95.3% 84.9%
4dnhA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.51 45.0 3.48e-01 94.8% 56.5%
1dysA00 3.20.20.40 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 1, 4-beta cellobiohydrolase 0.51 46.0 3.66e-01 98.3% 84.6%
2c2xA02 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.51 39.0 4.10e-01 90.7% 90.3%
2fwmX00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 43.0 4.04e-01 91.3% 87.3%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4974286 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.91 87.0 7.98e-01 100.0% 81.9%
3197201 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.89 86.0 6.31e-01 100.0% 44.5%
5002767 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.89 86.0 8.38e-01 100.0% 95.7%
4996622 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.89 86.0 8.14e-01 100.0% 95.9%
5030440 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.89 86.0 7.74e-01 100.0% 80.0%
5007938 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.89 85.0 8.01e-01 100.0% 88.0%
3938064 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.88 85.0 7.93e-01 100.0% 94.1%
3517191 2004.1.1.2 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.88 85.0 7.66e-01 100.0% 93.2%
3717015 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.88 85.0 8.24e-01 100.0% 97.8%
4569125 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.88 85.0 7.18e-01 100.0% 68.8%
3629727 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.88 85.0 7.47e-01 100.0% 83.8%
4976689 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.88 84.0 8.40e-01 99.4% 98.9%
4534528 2004.1.1.420 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, TIP49 0.88 84.0 7.33e-01 100.0% 73.5%
None 0.88 84.0 6.04e-01 100.0% 40.9%
4654620 4070.1.1.0 alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like 0.88 84.0 5.92e-01 100.0% 37.9%
None 0.88 84.0 6.72e-01 100.0% 57.4%
None 0.88 84.0 7.77e-01 100.0% 85.2%
None 0.88 84.0 8.30e-01 100.0% 99.4%
3256466 2004.1.1.420 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, TIP49 0.88 84.0 7.13e-01 100.0% 68.8%
4968899 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.88 82.0 8.31e-01 98.3% 98.8%
5075231 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.87 84.0 6.21e-01 100.0% 45.1%
4138327 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.87 84.0 7.18e-01 100.0% 69.4%
3597368 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.87 84.0 7.65e-01 100.0% 95.8%
3497732 2004.1.1.432 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, Rad17 0.87 84.0 7.46e-01 100.0% 77.0%
4013394 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.87 84.0 7.72e-01 100.0% 85.7%
4506715 4070.1.1.0 alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like 0.87 83.0 6.05e-01 100.0% 42.6%
3628405 2004.1.1.420 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, TIP49 0.87 84.0 7.79e-01 100.0% 87.8%
3464738 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.87 83.0 6.73e-01 100.0% 60.3%
4569056 2004.1.1.415 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, RuvB_N 0.87 82.0 7.77e-01 100.0% 85.0%
None 0.87 83.0 8.10e-01 100.0% 97.8%
4946867 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.87 83.0 8.02e-01 100.0% 94.2%
5078742 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.87 83.0 6.22e-01 100.0% 46.3%
3369822 2004.1.1.415 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, RuvB_N 0.87 83.0 7.54e-01 100.0% 81.8%
4980996 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.87 81.0 7.04e-01 97.1% 69.0%
4996684 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.87 80.0 6.63e-01 95.3% 61.8%
4992423 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.87 82.0 8.01e-01 100.0% 91.9%
3652313 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.87 83.0 7.52e-01 100.0% 93.6%
3416470 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.87 83.0 8.01e-01 100.0% 93.2%
None 0.87 83.0 7.82e-01 100.0% 89.0%
4947261 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.87 83.0 7.71e-01 100.0% 83.7%
3604160 2004.1.1.420 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, TIP49 0.87 81.0 7.73e-01 98.8% 86.2%
3701562 148.1.3.178 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA 0.87 83.0 5.90e-01 100.0% 40.9%
4937668 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.86 83.0 7.97e-01 100.0% 94.2%
5001488 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.86 83.0 5.84e-01 100.0% 38.1%
4680580 2004.1.1.415 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, RuvB_N 0.86 83.0 7.28e-01 100.0% 78.2%
5036996 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.86 83.0 8.05e-01 100.0% 97.3%
None 0.86 83.0 7.57e-01 100.0% 81.4%
5000554 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.86 83.0 7.78e-01 100.0% 87.0%
4016893 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.86 82.0 6.86e-01 100.0% 64.7%
4989618 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.86 82.0 7.63e-01 100.0% 82.9%
3275379 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.86 82.0 7.84e-01 100.0% 91.3%
4514470 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.86 82.0 7.40e-01 100.0% 92.4%
3712032 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.86 82.0 7.00e-01 100.0% 68.5%
3300350 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.86 82.0 7.44e-01 100.0% 83.2%
3253646 2004.1.1.425 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, DUF815 0.86 82.0 7.90e-01 100.0% 94.2%
3576751 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.86 82.0 7.38e-01 100.0% 78.2%
3205325 2004.1.1.425 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, DUF815 0.86 82.0 7.88e-01 100.0% 94.2%
3700966 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.86 81.0 6.02e-01 98.8% 49.7%
3435539 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.86 78.0 7.24e-01 95.3% 80.0%
3180228 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.86 82.0 7.90e-01 100.0% 95.3%
3740404 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.86 75.0 7.80e-01 92.4% 97.5%
3683722 2004.1.1.420 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, TIP49 0.85 81.0 7.33e-01 98.8% 87.3%
3717272 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.85 81.0 7.58e-01 99.4% 85.4%
3659784 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.85 81.0 5.56e-01 100.0% 34.3%
3271038 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.85 81.0 7.65e-01 99.4% 97.5%
4329588 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.85 81.0 7.64e-01 100.0% 85.5%
3296104 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.85 81.0 7.14e-01 100.0% 84.2%
4947977 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.85 78.0 7.33e-01 97.1% 80.5%
None 0.85 81.0 7.58e-01 100.0% 87.8%
3662125 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.85 81.0 5.72e-01 100.0% 45.0%
3937524 148.1.3.178 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA 0.85 81.0 6.26e-01 100.0% 51.6%
5082057 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.85 80.0 6.06e-01 97.7% 63.3%
3301185 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.85 81.0 7.12e-01 100.0% 77.9%
5066569 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.85 81.0 5.52e-01 100.0% 32.4%
3877788 2004.1.1.425 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, DUF815 0.85 81.0 7.72e-01 100.0% 93.8%
4001466 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.85 77.0 6.58e-01 94.2% 72.9%
4936778 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.85 81.0 6.84e-01 100.0% 65.3%
3467496 2004.1.1.2 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.85 78.0 7.18e-01 96.5% 89.3%
3609341 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.85 81.0 6.68e-01 100.0% 64.3%
3263243 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.84 76.0 7.22e-01 94.2% 86.0%
None 0.84 81.0 7.70e-01 100.0% 93.3%
None 0.84 79.0 6.64e-01 97.7% 86.4%
4000731 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.84 74.0 7.54e-01 91.3% 99.4%
5071821 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.84 80.0 7.91e-01 100.0% 96.7%
4967914 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.84 78.0 7.75e-01 96.5% 97.7%
3802821 2004.1.1.432 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, Rad17 0.83 78.0 7.38e-01 98.3% 98.5%
None 0.83 67.0 7.12e-01 95.3% 92.3%
5047190 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.83 78.0 7.65e-01 100.0% 93.3%
5002765 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.83 75.0 7.43e-01 100.0% 90.6%
4998712 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.83 75.0 7.59e-01 94.8% 97.6%
4048177 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.83 79.0 6.87e-01 100.0% 76.7%
3537109 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.82 79.0 6.85e-01 100.0% 77.1%
None 0.82 78.0 7.05e-01 100.0% 88.0%
3237199 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.82 70.0 7.34e-01 94.2% 98.1%
4027191 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.82 78.0 6.79e-01 100.0% 84.1%
3399179 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.81 72.0 7.52e-01 94.2% 100.0%
3352161 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.81 77.0 6.85e-01 100.0% 82.6%
None 0.80 76.0 7.11e-01 100.0% 90.2%
3605779 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.78 74.0 7.15e-01 100.0% 98.4%
3414732 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.76 71.0 5.90e-01 100.0% 66.3%
D3 high residues 244-300
PDB
Domain cluster: representative
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 53.0 4.27e-01 73.7% 91.3%
3tjmA02 1.10.1470.20 Mainly Alpha › Orthogonal Bundle › Protein Yjbj; Chain: A; › Fatty acid synthase; domain 2 0.73 56.0 4.88e-01 87.7% 54.4%
1gjsA00 1.10.8.40 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Albumin-binding domain 0.70 53.0 5.08e-01 86.0% 70.8%
1vhnA02 1.10.1200.80 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Putative flavin oxidoreducatase; domain 2 0.69 52.0 4.82e-01 84.2% 64.8%
2avuB00 1.10.4000.10 Mainly Alpha › Orthogonal Bundle › Flagellar transcriptional activator fold › Flagellar transcriptional activator FlhD 0.67 47.0 3.90e-01 73.7% 68.3%
1e1dA02 1.20.1270.20 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.67 56.0 5.02e-01 98.2% 90.5%
3if8B02 1.20.58.730 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.66 54.0 4.52e-01 91.2% 58.0%
4irlB02 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.66 47.0 4.05e-01 78.9% 47.3%
3d6jA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.65 45.0 4.39e-01 77.2% 64.2%
3lphC00 6.10.140.630 Special › Helix non-globular › Helix Hairpins › 0.65 44.0 4.42e-01 70.2% 81.0%
3jsjC00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.62 47.0 3.28e-01 82.5% 65.6%
1v9mA03 1.20.1690.10 Mainly Alpha › Up-down Bundle › V-type ATP synthase subunit C fold › V-type ATP synthase subunit C domain 0.61 50.0 4.19e-01 89.5% 87.5%
2g80A02 1.10.720.60 Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › 0.60 43.0 3.85e-01 75.4% 88.5%
3ni7A00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.52 41.0 3.06e-01 94.7% 91.4%
1k8kA04 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.51 38.0 3.38e-01 86.0% 80.4%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3274254 1128.1.1.1 alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR 0.70 56.0 4.56e-01 87.7% 62.9%
5001160 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.69 54.0 4.19e-01 87.7% 49.2%
4821793 601.30.1.1 alpha bundles › Four-helical up-and-down bundle › Helical bundle domain in hypothetical protein PH1320 › Helical bundle domain in hypothetical protein PH1320 › NOG1_N 0.69 56.0 5.76e-01 94.7% 98.1%
4169745 4044.1.1.0 alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins 0.64 53.0 4.95e-01 96.5% 93.3%
4880806 524.1.1.0 alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p 0.62 52.0 4.34e-01 96.5% 76.0%
4026676 110.1.1.0 alpha arrays › DEATH domain › DEATH domain › DEATH domain 0.59 42.0 4.08e-01 80.7% 69.2%
2531 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.57 52.0 4.77e-01 100.0% 94.4%
1247851 101.1.1.5 alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.53 46.0 4.20e-01 100.0% 85.9%
1488428 2485.1.1.52 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_15 0.53 41.0 3.15e-01 91.2% 59.4%
4424455 101.1.1.5 alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.52 41.0 4.04e-01 84.2% 95.0%