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js4906-29-5_S40_scaffold_90_prodigal-single.1__X__X__00031

Bact-Vir

js4906-29-5_S40_scaffold_90_prodigal-single.1__X__X__00031

Identity

Kingdom:
phage

Quality

83.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-112
PDB
CATH (59)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1z9fA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.85 67.0 7.25e-01 96.2% 95.5%
1u5kA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.85 60.0 6.69e-01 96.2% 91.5%
1b9mA03 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.83 43.0 5.23e-01 70.2% 76.1%
1v43A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.82 42.0 5.29e-01 71.2% 81.2%
3kojB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.81 65.0 6.94e-01 94.2% 95.6%
1wydA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.81 61.0 6.17e-01 96.2% 79.4%
5gqoA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.80 64.0 6.68e-01 98.1% 89.7%
1ue6D00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.80 70.0 7.05e-01 98.1% 92.3%
4gs3A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.80 65.0 6.97e-01 98.1% 98.9%
3u4zA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.80 63.0 6.21e-01 99.0% 78.9%
5odnC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.80 70.0 7.07e-01 95.2% 94.1%
3k7uC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.79 69.0 7.18e-01 98.1% 98.0%
3en2A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.79 65.0 6.97e-01 95.2% 98.9%
6rupA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.78 71.0 6.97e-01 96.2% 95.5%
2hqlA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.78 65.0 6.89e-01 93.3% 98.9%
5zg8A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.78 60.0 6.14e-01 96.2% 82.4%
6aqgA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.77 61.0 5.47e-01 98.1% 61.0%
3nemA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.77 60.0 6.02e-01 96.2% 80.0%
4glaC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.77 61.0 6.55e-01 97.1% 96.6%
1bbuA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.77 59.0 5.25e-01 96.2% 59.3%
1gm5A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.76 59.0 5.99e-01 97.1% 82.4%
1l0wA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.76 61.0 6.06e-01 96.2% 81.1%
4pofA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.76 64.0 6.40e-01 98.1% 88.5%
3d31A03 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.76 42.0 4.98e-01 72.1% 78.9%
1fr3A00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.76 44.0 5.41e-01 73.1% 89.6%
1gutA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.76 44.0 5.39e-01 72.1% 89.6%
4damC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.76 67.0 6.87e-01 99.0% 97.0%
2vw9B00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.76 67.0 6.75e-01 95.2% 99.0%
3fhwA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.75 66.0 6.75e-01 97.1% 97.0%
3f2bA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.75 59.0 6.16e-01 98.1% 89.6%
1se8A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.75 67.0 6.56e-01 98.1% 89.2%
2cwaA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.74 70.0 6.90e-01 100.0% 98.2%
3ulpD00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.74 66.0 6.47e-01 96.2% 95.6%
3i7fA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.74 61.0 5.64e-01 96.2% 70.3%
3k8aB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.74 64.0 6.52e-01 100.0% 94.2%
2vl6A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.73 65.0 6.35e-01 95.2% 89.3%
6nrzA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.73 61.0 5.26e-01 96.2% 59.4%
3m4pA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.72 60.0 5.89e-01 96.2% 81.2%
4b08A01 2.40.50.730 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.71 53.0 5.92e-01 96.2% 98.8%
3rn5A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.71 52.0 5.54e-01 98.1% 87.0%
3kf6A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.70 66.0 5.97e-01 100.0% 83.8%
1v1qA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.70 64.0 6.25e-01 97.1% 91.8%
4hikA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.69 64.0 5.78e-01 100.0% 84.1%
8aa9A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.69 61.0 5.95e-01 100.0% 86.8%
1eu3A02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.67 50.0 5.57e-01 95.2% 100.0%
6lbtA01 2.40.50.810 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.67 60.0 5.33e-01 96.2% 73.2%
4gnxB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.66 63.0 5.92e-01 100.0% 86.9%
1fguB01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 56.0 5.65e-01 95.2% 91.4%
2pi2D00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 61.0 5.70e-01 100.0% 83.7%
3mc0B02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.64 48.0 5.20e-01 95.2% 96.4%
4hceA00 2.40.50.860 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.64 56.0 5.23e-01 95.2% 91.5%
4joiA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 59.0 5.30e-01 100.0% 85.8%
2b39A13 2.40.50.120 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.63 58.0 5.28e-01 100.0% 83.8%
2f4iA02 2.40.50.420 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Envelope glycoprotein gp160, DUF2291, alpha/beta domain 0.63 52.0 5.08e-01 95.2% 80.0%
3a35A02 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.61 42.0 4.52e-01 71.2% 97.8%
5jpnC02 2.40.50.120 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.61 56.0 4.87e-01 100.0% 70.1%
1i8dA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.61 42.0 4.54e-01 71.2% 97.8%
1xweA01 2.40.50.120 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.60 54.0 4.90e-01 100.0% 79.0%
4hspA00 2.40.50.870 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Protein of unknown function (DUF3299) 0.58 50.0 4.44e-01 99.0% 64.4%
ECOD (95)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4945259 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.85 63.0 6.57e-01 98.1% 83.2%
5078989 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.83 68.0 6.13e-01 100.0% 65.9%
5013366 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.83 64.0 6.10e-01 100.0% 70.0%
4931472 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.82 67.0 5.24e-01 100.0% 44.0%
159268 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.82 70.0 5.42e-01 100.0% 45.1%
4032979 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.81 73.0 7.19e-01 96.2% 91.8%
4478491 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.80 73.0 7.32e-01 97.1% 100.0%
174115 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.80 63.0 6.93e-01 94.2% 100.0%
3172086 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.79 61.0 5.89e-01 96.2% 72.2%
4277262 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.79 73.0 6.95e-01 98.1% 90.7%
3375524 2.1.1.229 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30940 0.79 71.0 6.72e-01 98.1% 82.5%
3963927 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.79 62.0 6.15e-01 97.1% 78.2%
3701262 2.1.1.225 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30388 0.79 71.0 6.55e-01 96.2% 90.0%
3593304 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.78 62.0 5.82e-01 96.2% 68.8%
4232994 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.78 71.0 7.03e-01 97.1% 91.8%
3608487 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.78 69.0 6.91e-01 94.2% 91.4%
5030363 2.1.1.80 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.78 67.0 6.60e-01 98.1% 86.4%
164228 2.1.1.54 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF3217 0.78 67.0 6.73e-01 98.1% 91.3%
2330653 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.78 63.0 6.65e-01 96.2% 93.6%
3698264 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.78 63.0 4.99e-01 96.2% 44.5%
5052151 2.1.1.80 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.78 65.0 6.27e-01 95.2% 80.0%
4225239 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.77 62.0 6.12e-01 96.2% 79.1%
5003084 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.77 67.0 5.07e-01 100.0% 42.7%
4938219 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.77 64.0 6.38e-01 95.2% 85.7%
294 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.77 71.0 6.28e-01 98.1% 75.9%
4170378 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.77 69.0 6.70e-01 96.2% 90.4%
2035523 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.77 73.0 7.11e-01 100.0% 96.4%
3924081 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.77 71.0 6.36e-01 98.1% 77.1%
4680392 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.77 71.0 7.02e-01 99.0% 93.6%
4137219 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.77 69.0 7.05e-01 96.2% 99.0%
5016178 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.77 61.0 6.10e-01 95.2% 82.9%
3600626 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.76 67.0 6.87e-01 95.2% 97.0%
3814285 2.1.1.229 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30940 0.76 71.0 6.99e-01 99.0% 95.5%
3839607 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.76 69.0 6.63e-01 97.1% 89.8%
2845667 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.76 68.0 6.74e-01 99.0% 90.8%
3829265 2.1.1.229 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30940 0.76 70.0 6.67e-01 98.1% 99.2%
3604365 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.76 61.0 6.11e-01 95.2% 83.8%
3707760 2.1.1.225 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30388 0.76 71.0 6.70e-01 99.0% 98.3%
3215667 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.76 70.0 6.62e-01 98.1% 90.8%
5082519 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.76 67.0 5.21e-01 100.0% 46.7%
3491964 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.75 70.0 6.40e-01 98.1% 96.2%
4044404 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.75 67.0 6.72e-01 95.2% 100.0%
3716709 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.75 69.0 6.47e-01 98.1% 89.4%
3616890 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.75 69.0 6.70e-01 99.0% 92.2%
4047115 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.75 68.0 6.98e-01 96.2% 100.0%
5000768 2.1.1.80 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.75 67.0 6.46e-01 99.0% 87.0%
3263786 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.74 69.0 6.28e-01 100.0% 79.3%
4547854 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.74 61.0 6.05e-01 95.2% 81.8%
3741507 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.74 67.0 6.89e-01 97.1% 100.0%
3507463 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.74 65.0 6.30e-01 96.2% 85.2%
3448049 2.1.1.229 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30940 0.74 68.0 6.81e-01 99.0% 96.2%
4029582 2.1.1.80 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.74 67.0 6.48e-01 97.1% 88.7%
5016563 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.74 63.0 6.05e-01 98.1% 80.0%
381191 2.1.1.122 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB_1 0.74 64.0 6.52e-01 100.0% 94.2%
3392389 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.73 69.0 6.51e-01 100.0% 90.0%
3473720 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.73 66.0 6.46e-01 96.2% 91.8%
4024258 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.73 65.0 6.18e-01 95.2% 85.8%
3995685 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.72 66.0 6.53e-01 98.1% 97.2%
3365669 2.1.1.229 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30940 0.72 68.0 6.67e-01 99.0% 93.6%
3680255 2.1.1.67 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ten1_2 0.72 51.0 5.10e-01 95.2% 70.6%
4122961 2.1.1.122 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB_1 0.72 64.0 6.53e-01 95.2% 98.0%
3690510 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.72 65.0 6.40e-01 96.2% 92.7%
4238279 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.71 67.0 6.44e-01 99.0% 93.9%
3467519 2.1.1.229 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30940 0.70 59.0 5.93e-01 88.5% 92.4%
4068016 2.1.1.122 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB_1 0.70 65.0 6.48e-01 98.1% 97.1%
4084495 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.70 65.0 6.50e-01 98.1% 97.1%
4626934 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 64.0 6.47e-01 97.1% 98.1%
5068809 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 66.0 4.98e-01 100.0% 56.4%
3239000 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 66.0 6.06e-01 100.0% 86.2%
4968172 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 66.0 5.00e-01 100.0% 57.3%
5004339 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 65.0 5.46e-01 100.0% 76.8%
317 2.1.1.122 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB_1 0.70 64.0 6.25e-01 97.1% 91.8%
5005288 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 65.0 5.61e-01 100.0% 85.2%
4127161 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.69 61.0 6.28e-01 98.1% 100.0%
4020700 2.1.1.72 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › POT1PC 0.69 64.0 5.50e-01 100.0% 79.4%
3544107 2.1.1.288 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF4502 0.67 57.0 5.99e-01 96.2% 100.0%
4071867 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.67 59.0 5.52e-01 98.1% 77.6%
3177392 2.1.1.52 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Stn1 0.67 63.0 5.04e-01 100.0% 73.7%
3856954 375.1.1.308 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF4502 0.67 56.0 5.87e-01 94.2% 98.9%
4488657 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.66 45.0 4.13e-01 74.0% 55.4%
4068524 2.4.1.0 beta barrels › OB-fold › MOP-like › MOP-like 0.66 45.0 4.18e-01 74.0% 56.6%
4014974 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.65 59.0 4.22e-01 100.0% 35.4%
3733907 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.65 59.0 5.41e-01 100.0% 76.3%
3210094 2.1.1.289 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon, Rep-A_N 0.65 59.0 4.23e-01 100.0% 36.1%
5078557 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.65 54.0 4.91e-01 96.2% 68.1%
4547794 2.4.1.0 beta barrels › OB-fold › MOP-like › MOP-like 0.64 44.0 4.07e-01 74.0% 57.0%
3171302 2.1.1.119 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM10_OB 0.64 59.0 4.72e-01 98.1% 91.1%
3929663 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.64 58.0 5.39e-01 100.0% 84.6%
3948921 2.1.1.139 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Slp 0.63 59.0 5.51e-01 99.0% 93.6%
3830803 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.63 53.0 5.30e-01 92.3% 88.6%
3179184 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 50.0 5.28e-01 97.1% 98.9%
3497958 2.1.1.69 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RMI2 0.62 58.0 4.97e-01 100.0% 74.2%
3891382 2.3.1.2 beta barrels › OB-fold › TIMP-like › TIMP-like › NTR 0.60 54.0 4.75e-01 100.0% 76.8%
3620886 5.1.4.34 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup88 0.60 40.0 2.68e-01 70.2% 61.5%
3963302 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.54 42.0 4.23e-01 82.7% 97.1%
D2 high residues 117-226
PDB
CATH (35)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3k8aB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.74 60.0 6.21e-01 96.4% 91.3%
3en2A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.74 56.0 6.15e-01 96.4% 96.7%
4me3A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.73 54.0 5.72e-01 97.3% 86.6%
4pofA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.72 56.0 5.80e-01 97.3% 86.5%
1l0wA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.71 55.0 5.62e-01 100.0% 83.0%
1ue6D00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.71 59.0 6.10e-01 99.1% 93.3%
3i7fA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.70 55.0 5.26e-01 100.0% 71.9%
2vw9B00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.69 60.0 6.14e-01 95.5% 97.1%
2zxrA01 2.40.50.460 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.69 45.0 4.00e-01 96.4% 45.6%
2hqlA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.69 52.0 5.68e-01 94.5% 96.7%
3ulpD00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.69 61.0 6.06e-01 97.3% 93.8%
6rupA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.68 59.0 5.94e-01 97.3% 93.7%
1se8A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.67 55.0 5.54e-01 97.3% 87.4%
3kf8A00 2.40.50.1040 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.67 57.0 4.59e-01 99.1% 48.3%
1eu3A02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.66 46.0 5.30e-01 96.4% 98.8%
2vl6A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 56.0 5.58e-01 96.4% 91.1%
1uapA00 2.40.50.120 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.65 49.0 4.58e-01 96.4% 65.6%
1je5A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 59.0 4.90e-01 100.0% 92.8%
4gnxC03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 56.0 4.69e-01 97.3% 76.0%
3rmhB00 2.40.50.810 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.59 52.0 4.87e-01 98.2% 78.2%
4jg2A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 53.0 4.43e-01 100.0% 83.2%
1jb7A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 51.0 4.38e-01 100.0% 61.5%
1krhA02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.57 41.0 4.40e-01 74.5% 99.0%
2i46A00 2.40.50.960 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.57 52.0 4.63e-01 99.1% 71.7%
4g1vA02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.55 41.0 4.08e-01 79.1% 99.2%
1tvcA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.55 40.0 4.04e-01 75.5% 93.6%
1a8pA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.55 39.0 4.16e-01 72.7% 97.9%
6mv2A02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.54 38.0 3.96e-01 72.7% 100.0%
2gpjA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.54 40.0 4.17e-01 76.4% 100.0%
2eixA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.54 38.0 3.95e-01 73.6% 95.3%
4yhbA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.54 40.0 3.78e-01 77.3% 93.8%
5tr9A01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.54 38.0 4.06e-01 72.7% 96.9%
5ylyA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.53 38.0 3.85e-01 74.5% 97.3%
2q30A01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 22.0 2.46e-01 90.0% 44.3%
2np2A00 4.10.520.10 Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins 0.50 26.0 2.72e-01 83.6% 52.0%
ECOD (38)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3604594 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.76 57.0 5.88e-01 96.4% 81.9%
3791686 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.75 57.0 5.24e-01 100.0% 62.1%
4869653 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.75 56.0 6.04e-01 99.1% 89.6%
2035523 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.74 65.0 6.50e-01 97.3% 92.0%
3215667 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.74 66.0 6.45e-01 97.3% 88.3%
3783432 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.72 62.0 6.40e-01 96.4% 96.2%
3702518 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.72 63.0 6.37e-01 95.5% 99.1%
2845667 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.71 59.0 6.01e-01 98.2% 89.9%
4952879 2.1.1.80 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.71 53.0 5.32e-01 100.0% 78.2%
4964971 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.71 53.0 4.11e-01 97.3% 37.4%
3707760 2.1.1.225 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30388 0.70 64.0 6.23e-01 99.1% 91.7%
4487058 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.70 54.0 5.56e-01 100.0% 83.8%
3690510 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.70 61.0 6.12e-01 100.0% 93.6%
5012899 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 54.0 5.43e-01 97.3% 80.9%
5058885 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 53.0 4.66e-01 96.4% 55.0%
3667392 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.69 63.0 6.23e-01 99.1% 98.3%
4032979 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.69 61.0 6.13e-01 100.0% 94.5%
4478491 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.69 60.0 6.12e-01 97.3% 98.1%
3814481 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 62.0 5.68e-01 97.3% 80.0%
3783321 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.68 54.0 4.95e-01 100.0% 65.0%
3712376 2.1.1.225 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30388 0.67 58.0 5.70e-01 96.4% 86.7%
3599571 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.66 58.0 5.73e-01 96.4% 90.4%
3421521 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.66 60.0 5.74e-01 100.0% 96.0%
3595817 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.65 58.0 5.85e-01 96.4% 95.5%
3813767 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.64 57.0 5.37e-01 99.1% 88.1%
4527565 2.1.1.168 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF1980_C 0.64 48.0 4.40e-01 97.3% 60.7%
379 2.1.1.108 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SBB_T7 0.63 59.0 4.90e-01 100.0% 92.8%
3990037 2.1.1.168 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF1980_C 0.63 46.0 4.22e-01 97.3% 59.3%
5074460 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.63 51.0 5.19e-01 100.0% 90.5%
4238279 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.62 56.0 5.54e-01 99.1% 95.7%
3613592 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 56.0 4.86e-01 96.4% 69.4%
3600031 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.61 55.0 5.48e-01 98.2% 97.3%
3514123 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.57 37.0 3.60e-01 87.3% 59.2%
5064585 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.54 35.0 3.91e-01 88.2% 82.2%
5019455 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.54 41.0 3.37e-01 91.8% 45.1%
3596308 11.1.4.80 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › C2_ITFG1 0.51 43.0 3.98e-01 90.9% 83.6%
3326287 4051.1.1.1 a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B 0.51 33.0 3.29e-01 70.0% 60.0%
4965661 327.7.1.2 a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › FKBP26_C 0.50 35.0 3.86e-01 79.1% 92.9%