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js4906-29-5_S40_scaffold_9_prodigal-single.1__X__X__00014
Bact-Virjs4906-29-5_S40_scaffold_9_prodigal-single.1__X__X__00014
Identity
- Kingdom:
- phage
Quality
88.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-233
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1n1fA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.54 | 28.0 | 3.34e-01 | 88.0% | 69.9% |
| 4v3iA00 | 1.25.40.590 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Type IV / VI secretion system, DotU | 0.51 | 27.0 | 3.21e-01 | 95.3% | 73.9% |
D2
high
residues 244-340
Domain cluster:
rep: js4906-29-5_S40_scaffold_90_prodigal-single.1__X__X__00055__D766-852
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13306.13 best | LRR_5 | 43.4 | 4.20e-11 | 82.5% | 56.7% |