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js4906-29-5_S40_scaffold_9_prodigal-single.1__X__X__00014

Bact-Vir

js4906-29-5_S40_scaffold_9_prodigal-single.1__X__X__00014

Identity

Kingdom:
phage

Quality

88.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-233
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1n1fA00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.54 28.0 3.34e-01 88.0% 69.9%
4v3iA00 1.25.40.590 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Type IV / VI secretion system, DotU 0.51 27.0 3.21e-01 95.3% 73.9%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3953479 601.1.1.136 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › EccD 0.53 41.0 3.70e-01 80.7% 93.5%
D2 high residues 244-340
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13306.13 best LRR_5 43.4 4.20e-11 82.5% 56.7%