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js4906-29-5_S40_scaffold_9_prodigal-single.1__X__X__00034

Bact-Vir

js4906-29-5_S40_scaffold_9_prodigal-single.1__X__X__00034

Identity

Kingdom:
phage

Quality

88.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-118
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3bjsA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.58 32.0 3.21e-01 100.0% 52.1%
6rupA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 32.0 3.29e-01 95.7% 64.0%
1tkkA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.50 36.0 3.63e-01 82.1% 74.8%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3743526 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.67 37.0 3.70e-01 90.6% 52.5%
4997175 218.1.1.1 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N 0.61 32.0 3.38e-01 100.0% 55.5%
4965187 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 28.0 3.61e-01 74.4% 78.5%
4303291 1.1.7.7 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.56 31.0 3.30e-01 100.0% 61.0%
3291549 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.54 31.0 3.22e-01 100.0% 60.0%
4969691 304.139.1.2 ↗ a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs 0.53 37.0 2.95e-01 71.8% 98.4%
3998660 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 28.0 3.13e-01 94.0% 65.6%