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k141_307134_prodigal-single.1__X__X__00001

Bact-Vir

k141_307134_prodigal-single.1__X__X__00001

Identity

Kingdom:
phage

Quality

55.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 110-199
PDB
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4m0nA02 3.55.50.30 Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › 0.83 65.0 6.99e-01 91.1% 97.4%
4e9jB01 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.81 66.0 5.61e-01 91.1% 55.8%
1wruA02 3.55.50.10 Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › Baseplate protein-like domains 0.80 70.0 7.08e-01 94.4% 95.5%
2p5zX02 3.55.50.10 Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › Baseplate protein-like domains 0.79 73.0 7.11e-01 98.9% 94.8%
4jtmA00 3.55.50.30 Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › 0.79 65.0 6.83e-01 92.2% 97.5%
3ossD00 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.78 67.0 5.46e-01 91.1% 57.3%
4g08A01 3.55.50.30 Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › 0.78 57.0 6.33e-01 86.7% 100.0%
3adyA00 3.55.50.60 Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › DotD protein 0.78 67.0 6.46e-01 100.0% 82.4%
1k28D02 3.55.50.20 Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › 0.78 69.0 7.03e-01 96.7% 100.0%
7pmpA01 3.55.50.30 Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › 0.78 60.0 6.57e-01 87.8% 100.0%
3d37A02 3.55.50.10 Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › Baseplate protein-like domains 0.77 64.0 6.62e-01 93.3% 95.3%
4uhvA02 3.55.50.10 Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › Baseplate protein-like domains 0.75 67.0 6.67e-01 98.9% 94.6%
1vx7X00 3.30.1360.210 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.59 40.0 3.95e-01 71.1% 100.0%
4gczB03 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.55 44.0 3.67e-01 87.8% 68.9%
1o4uA01 3.90.1170.20 Alpha Beta › Alpha-Beta Complex › Aldehyde Oxidoreductase; domain 3 › Quinolinate phosphoribosyl transferase, N-terminal domain 0.53 40.0 3.68e-01 80.0% 94.1%
4bzaA01 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.51 35.0 3.87e-01 72.2% 100.0%
ECOD (52)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3966286 3070.1.1.0 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins 0.90 72.0 7.80e-01 94.4% 100.0%
3948879 3070.1.1.0 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins 0.89 71.0 7.73e-01 93.3% 100.0%
4008875 3070.1.1.4 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › STN 0.88 70.0 7.56e-01 93.3% 100.0%
4809347 3070.1.1.16 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › PF30637 0.87 73.0 7.63e-01 100.0% 96.3%
185652 3070.1.1.4 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › STN 0.87 74.0 6.49e-01 100.0% 63.3%
4480906 3070.1.1.10 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › T3S_SPI-1_N0 0.87 72.0 7.58e-01 97.8% 97.5%
3974036 3070.1.1.10 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › T3S_SPI-1_N0 0.87 69.0 7.46e-01 93.3% 100.0%
3948421 3070.1.1.2 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Phage_GPD 0.86 70.0 7.23e-01 94.4% 90.6%
4048982 3070.1.1.0 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins 0.86 70.0 7.44e-01 96.7% 97.5%
1815424 3070.1.1.4 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › STN 0.86 68.0 7.41e-01 93.3% 100.0%
4889789 3070.1.1.16 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › PF30637 0.86 73.0 7.48e-01 96.7% 94.2%
3977381 3070.1.1.2 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Phage_GPD 0.85 71.0 7.28e-01 97.8% 92.9%
4846239 3070.1.1.12 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Gp44-like_2nd 0.84 74.0 7.70e-01 100.0% 100.0%
4087530 3070.1.1.0 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins 0.83 66.0 7.12e-01 93.3% 100.0%
3966573 3070.1.1.2 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Phage_GPD 0.83 74.0 7.42e-01 98.9% 94.4%
3967438 3070.1.1.2 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Phage_GPD 0.83 74.0 7.41e-01 100.0% 94.4%
3972306 3070.1.1.0 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins 0.83 73.0 7.39e-01 98.9% 94.4%
1108144 3070.1.1.7 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › FecR_C 0.83 65.0 6.75e-01 91.1% 89.3%
4200887 3070.1.1.17 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › YQBQ 0.82 74.0 7.46e-01 98.9% 96.7%
3503726 3070.1.1.8 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › DotD 0.81 67.0 7.02e-01 96.7% 98.8%
4484921 3070.1.1.11 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › type_II_gspD_N0 0.80 67.0 7.13e-01 93.3% 100.0%
2588602 3070.1.1.0 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins 0.80 62.0 6.46e-01 90.0% 90.2%
185933 3070.1.1.12 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Gp44-like_2nd 0.80 70.0 7.08e-01 94.4% 95.5%
3974451 3070.1.1.0 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins 0.79 61.0 6.34e-01 90.0% 87.1%
3974983 3070.1.1.10 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › T3S_SPI-1_N0 0.79 60.0 6.35e-01 90.0% 91.3%
3604611 3070.1.1.0 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins 0.79 65.0 6.56e-01 97.8% 88.9%
3982238 3070.1.1.0 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins 0.78 70.0 7.05e-01 98.9% 95.6%
3967139 3070.1.1.11 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › type_II_gspD_N0 0.78 65.0 6.89e-01 95.6% 100.0%
146928 3070.1.1.8 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › DotD 0.78 67.0 6.61e-01 100.0% 87.5%
4033374 3070.1.1.0 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins 0.78 66.0 6.80e-01 92.2% 96.5%
1833073 3070.1.1.11 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › type_II_gspD_N0 0.78 62.0 6.52e-01 91.1% 93.9%
4339226 3070.1.1.0 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins 0.77 64.0 6.55e-01 94.4% 92.9%
184487 3070.1.1.12 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Gp44-like_2nd 0.77 64.0 6.62e-01 93.3% 95.3%
2883219 3070.1.1.11 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › type_II_gspD_N0 0.77 60.0 6.03e-01 87.8% 82.2%
1070142 3070.1.1.11 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › type_II_gspD_N0 0.77 64.0 6.68e-01 92.2% 98.8%
2725959 3070.1.1.0 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins 0.76 60.0 5.13e-01 94.4% 52.4%
3972068 3070.1.1.0 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins 0.76 67.0 6.71e-01 95.6% 94.4%
3972183 3070.1.1.4 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › STN 0.76 62.0 6.36e-01 96.7% 92.9%
3973766 3070.1.1.0 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins 0.75 58.0 6.17e-01 90.0% 94.9%
3059160 3070.1.1.13 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › E217_GP41 0.74 61.0 6.43e-01 94.4% 100.0%
3967349 3070.1.1.4 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › STN 0.74 64.0 6.62e-01 100.0% 100.0%
4241517 3070.1.1.6 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › TcpQ 0.73 60.0 6.34e-01 90.0% 100.0%
1936665 294.2.1.1 a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA 0.58 37.0 4.52e-01 93.3% 98.3%
5007365 225.1.1.3 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c 0.56 44.0 3.84e-01 84.4% 70.5%
3942178 225.1.1.3 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c 0.56 43.0 3.58e-01 84.4% 63.0%
4324625 225.1.1.3 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c 0.55 43.0 3.62e-01 84.4% 68.4%
3945353 225.1.1.3 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c 0.55 42.0 3.53e-01 84.4% 63.6%
4961509 225.1.1.3 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c 0.54 42.0 3.56e-01 84.4% 63.9%
1164240 225.1.1.0 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 0.53 41.0 3.82e-01 84.4% 93.9%
4674311 225.1.1.3 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c 0.52 41.0 3.47e-01 85.6% 67.1%
5038848 225.1.1.3 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c 0.51 39.0 3.26e-01 82.2% 86.1%
3970648 225.1.1.0 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 0.50 39.0 3.23e-01 84.4% 85.9%
D2 medium residues 12-105_333-401
PDB
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wruA01 2.30.300.10 Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold 0.72 66.0 6.48e-01 100.0% 89.1%
3cddA01 2.30.300.10 Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold 0.68 64.0 6.14e-01 100.0% 87.0%
2p5zX01 2.30.110.50 Mainly Beta › Roll › Pnp Oxidase; Chain A › 0.67 59.0 5.92e-01 100.0% 91.0%
3d37B01 2.30.300.10 Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold 0.67 61.0 5.93e-01 100.0% 87.9%
3qzqA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.67 26.0 3.92e-01 90.8% 84.1%
3fppA01 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.66 35.0 4.22e-01 93.3% 77.9%
3lnnA02 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.62 34.0 4.28e-01 93.3% 91.4%
3h7tA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.60 30.0 3.63e-01 91.4% 70.3%
1p57B02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.60 31.0 3.63e-01 91.4% 67.8%
5ejlA02 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.58 34.0 3.83e-01 97.5% 74.2%
1a7sA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.58 29.0 3.53e-01 91.4% 73.3%
ECOD (14)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3909822 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.72 44.0 5.32e-01 93.3% 90.9%
4062509 1.1.7.91 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25940 0.70 39.0 4.79e-01 93.3% 83.8%
3535347 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.67 42.0 4.94e-01 93.3% 88.7%
4057590 1.1.5.86 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZN3 0.66 40.0 4.30e-01 100.0% 69.3%
4273561 1.1.7.91 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25940 0.65 39.0 4.24e-01 93.3% 71.1%
5007131 1.1.7.28 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel 0.64 34.0 4.40e-01 93.3% 88.4%
3722811 1.1.7.24 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_8 0.63 39.0 4.57e-01 95.1% 87.0%
3943282 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.62 36.0 4.15e-01 97.5% 77.5%
3880678 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.61 43.0 4.74e-01 94.5% 90.0%
5040464 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.60 32.0 4.14e-01 93.3% 88.4%
3957568 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.58 33.0 4.11e-01 89.0% 91.9%
3187986 1.1.8.0 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.54 32.0 3.95e-01 92.6% 90.5%
2418866 1.1.7.23 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_9 0.53 33.0 3.87e-01 93.3% 89.4%
5014364 1.1.7.28 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel 0.51 37.0 4.08e-01 93.3% 91.1%