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k141_307134_prodigal-single.1__X__X__00056
Bact-Virk141_307134_prodigal-single.1__X__X__00056
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 32-108
Domain cluster:
rep: OM728297.1__WCS68239.1__Goe21_01290__00129__D22-78
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ottB02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.60 | 46.0 | 3.09e-01 | 83.1% | 82.6% |
| 1k32A01 | 2.120.10.60 | Mainly Beta › 6 Propeller › Neuraminidase › Tricorn protease N-terminal domain | 0.56 | 45.0 | 3.20e-01 | 92.2% | 63.2% |
| 3cxbA01 | 3.30.2440.10 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein SifA fold › Secreted effector protein SifA | 0.55 | 39.0 | 3.46e-01 | 75.3% | 62.6% |
| 3moiA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.54 | 39.0 | 2.92e-01 | 76.6% | 98.1% |
| 4a2lB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 42.0 | 2.92e-01 | 92.2% | 46.9% |
| 4fr9A00 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 45.0 | 3.73e-01 | 97.4% | 75.2% |
| 3nvnA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 45.0 | 2.94e-01 | 100.0% | 61.4% |
| 6f90A01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.51 | 43.0 | 3.06e-01 | 98.7% | 74.5% |
| 3rlfF02 | 3.10.650.10 | Alpha Beta › Roll › MalF N-terminal region-like › MalF N-terminal region-like | 0.50 | 37.0 | 3.63e-01 | 80.5% | 74.4% |
| 8b55A01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.50 | 39.0 | 3.03e-01 | 85.7% | 64.2% |
| 4n9jA02 | 3.30.1120.130 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.50 | 35.0 | 3.25e-01 | 75.3% | 58.9% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3743579 | 5.1.4.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH | 0.62 | 45.0 | 3.07e-01 | 79.2% | 54.1% |
| 5081122 | 4056.1.1.0 ↗ | beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein | 0.60 | 41.0 | 3.84e-01 | 72.7% | 75.0% |
| 4302938 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.55 | 37.0 | 3.63e-01 | 81.8% | 63.5% |
| 4024012 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 41.0 | 3.17e-01 | 83.1% | 65.7% |
| 3167513 | 381.1.1.3 ↗ | few secondary structure elements › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat › zf-C3HC | 0.54 | 38.0 | 3.52e-01 | 75.3% | 87.6% |
| 4031368 | 3264.1.1.0 ↗ | 0.53 | 40.0 | 3.37e-01 | 83.1% | 53.1% | |
| 3524259 | 633.23.1.1 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin | 0.53 | 34.0 | 2.63e-01 | 85.7% | 28.1% |
| 2982808 | 10.1.1.5 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Pentaxin | 0.51 | 40.0 | 3.01e-01 | 84.4% | 61.1% |