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k141_307134_prodigal-single.1__X__X__00124
Bact-Virk141_307134_prodigal-single.1__X__X__00124
Identity
- Kingdom:
- phage
Quality
92.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-62
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3gpvA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.73 | 50.0 | 3.88e-01 | 72.2% | 37.2% |
| 2yfvC00 | 6.10.250.2010 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.70 | 47.0 | 4.56e-01 | 96.3% | 63.3% |
| 8be0A01 | 3.40.91.90 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › Influenza RNA-dependent RNA polymerase subunit PA, endonuclease domain | 0.65 | 55.0 | 3.87e-01 | 100.0% | 75.4% |
| 1f02T00 | 4.10.820.10 | Few Secondary Structures › Irregular › Translocated Intimin Receptor; Chain T › Translocated intimin receptor, central domain | 0.64 | 45.0 | 4.21e-01 | 74.1% | 80.3% |
| 1u7kA00 | 1.10.375.10 | Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein | 0.61 | 47.0 | 3.66e-01 | 100.0% | 36.6% |
| 3deeA02 | 3.90.930.50 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.54 | 44.0 | 3.51e-01 | 94.4% | 43.0% |
| 2qr4A02 | 1.10.287.830 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › putative peptidase helix hairpin domain like | 0.52 | 38.0 | 4.03e-01 | 100.0% | 87.2% |
| 4uijA00 | 3.30.710.10 | Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A | 0.52 | 42.0 | 3.34e-01 | 87.0% | 51.9% |
| 3hwcA01 | 1.10.3140.10 | Mainly Alpha › Orthogonal Bundle › 4-hydroxybutyryl-coa dehydratase, domain 1 › 4-hydroxybutyryl-coa dehydratase, domain 1 | 0.50 | 40.0 | 3.12e-01 | 100.0% | 79.6% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3203986 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.63 | 44.0 | 4.70e-01 | 100.0% | 88.9% |
| 3369986 | 109.3.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank | 0.62 | 50.0 | 3.32e-01 | 96.3% | 46.3% |
| 4681348 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.59 | 50.0 | 4.12e-01 | 96.3% | 84.0% |
| 3173350 | 7516.1.1.20 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_34 | 0.59 | 41.0 | 2.47e-01 | 72.2% | 27.1% |
| 4643578 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.59 | 48.0 | 3.57e-01 | 87.0% | 39.2% |
| 3989376 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.56 | 48.0 | 3.93e-01 | 98.1% | 78.1% |
| 5057106 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.53 | 41.0 | 3.50e-01 | 87.0% | 80.0% |
| 4558649 | 3105.1.1.2 ↗ | a+b three layers › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › DUF5130 | 0.52 | 44.0 | 3.34e-01 | 100.0% | 60.1% |
| 4133702 | 107.1.1.9 ↗ | alpha arrays › Cytochrome c-like › Cytochrome c › Cytochrome c › Cytochrome_CBB3 | 0.51 | 42.0 | 3.26e-01 | 90.7% | 67.5% |
| 3724306 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.50 | 43.0 | 3.37e-01 | 98.1% | 70.8% |
| 3283003 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.50 | 41.0 | 3.54e-01 | 98.1% | 73.5% |