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k141_307134_prodigal-single.1__X__X__00131
Bact-Virk141_307134_prodigal-single.1__X__X__00131
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-93
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08719.18 best | NADAR | 72.2 | 8.80e-20 | 95.7% | 49.1% |
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8bauA01 | 1.10.357.40 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › YbiA-like | 0.87 | 79.0 | 6.13e-01 | 94.6% | 56.4% |
| 3g0oA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.60 | 39.0 | 3.62e-01 | 97.8% | 51.2% |
| 2zdiC00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.56 | 32.0 | 2.78e-01 | 95.7% | 33.8% |
| 1fxkB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.53 | 31.0 | 2.93e-01 | 95.7% | 47.7% |
| 2iw3A02 | 1.20.1390.20 | Mainly Alpha › Up-down Bundle › PWI domain › | 0.53 | 34.0 | 3.53e-01 | 93.5% | 67.8% |
| 1fxkC00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.50 | 30.0 | 2.73e-01 | 98.9% | 39.8% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3180309 | 4308.1.1.1 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like › NADAR | 0.91 | 84.0 | 6.28e-01 | 98.9% | 45.0% |
| 3600506 | 4308.1.1.0 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like | 0.91 | 72.0 | 5.92e-01 | 96.8% | 50.7% |
| 3789927 | 4308.1.1.1 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like › NADAR | 0.90 | 85.0 | 6.57e-01 | 100.0% | 50.6% |
| 3230342 | 4308.1.1.1 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like › NADAR | 0.90 | 86.0 | 6.34e-01 | 100.0% | 44.3% |
| 3230388 | 4308.1.1.1 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like › NADAR | 0.90 | 86.0 | 6.47e-01 | 100.0% | 47.7% |
| 4018277 | 4308.1.1.1 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like › NADAR | 0.87 | 82.0 | 6.38e-01 | 98.9% | 56.7% |
| 3514172 | 4308.1.1.1 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like › NADAR | 0.87 | 73.0 | 5.87e-01 | 95.7% | 49.7% |
| 3999784 | 4308.1.1.0 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like | 0.86 | 80.0 | 6.18e-01 | 100.0% | 57.9% |
| 3515177 | 4308.1.1.0 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like | 0.86 | 78.0 | 6.08e-01 | 96.8% | 60.9% |
| 3800544 | 4308.1.1.0 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like | 0.85 | 80.0 | 6.00e-01 | 100.0% | 57.1% |
| 3941374 | 4308.1.1.0 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like | 0.85 | 80.0 | 5.36e-01 | 100.0% | 38.4% |
| 3620605 | 4308.1.1.1 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like › NADAR | 0.79 | 75.0 | 5.91e-01 | 100.0% | 53.4% |
| 3359244 | 192.8.1.342 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › PHM7_cyt | 0.57 | 31.0 | 3.59e-01 | 89.2% | 73.8% |
| 4985682 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.53 | 47.0 | 4.19e-01 | 98.9% | 94.8% |
| 5079314 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.53 | 41.0 | 3.30e-01 | 94.6% | 41.0% |