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lambda_B
Euk-VirReptilian_orthoreovirus
lambda_B__YP_009020578__Reptilian_orthoreovirus__226613
Identity
- Accession:
- YP_009020578 ↗
- Protein ID:
- lambda_B
- Kingdom:
- euk
Quality
76.8
mean pLDDT
Taxonomy
Orthornavirae›
Duplornaviricota›
Resentoviricetes›
Reovirales›
Spinareoviridae›
Orthoreovirus›
Reptilian_orthoreovirus
TaxID: 226613
Cluster
View cluster (29 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 51-162_205-223
Domain cluster:
rep: core_RNA-dependent_RNA_polymerase__YP_009445963__Piscine_orthoreovirus__1157337__D63-154_212-236
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF07925.16 best | RdRP_5 | 92.0 | 2.60e-26 | 96.2% | 9.2% |
D2
medium
residues 180-204_224-287_322-379
Domain cluster:
rep: Lambda_B__YP_009246466__Mahlapitsi_orthoreovirus__2170064__D217-284_324-370_825-850
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF07925.16 best | RdRP_5 | 64.0 | 7.80e-18 | 63.3% | 6.0% |
| PF07925.16 | RdRP_5 | 39.8 | 1.60e-10 | 39.5% | 4.0% |
D3
medium
residues 380-447_531-564_592-677
Domain cluster:
rep: RNA_polymerase__YP_009110697__Cangyuan_orthoreovirus__1388882__D380-396_454-556_644-684
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF07925.16 best | RdRP_5 | 96.8 | 9.60e-28 | 46.3% | 7.1% |
| PF07925.16 | RdRP_5 | 64.9 | 4.00e-18 | 36.7% | 5.3% |
| PF07925.16 | RdRP_5 | 51.9 | 3.50e-14 | 19.7% | 2.8% |
D4
medium
residues 448-530
D5
medium
residues 565-591_678-799
Domain cluster:
rep: RNA_polymerase__YP_009110697__Cangyuan_orthoreovirus__1388882__D557-588_685-792
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF07925.16 best | RdRP_5 | 191.1 | 3.40e-56 | 82.5% | 9.6% |
| PF07925.16 | RdRP_5 | 35.2 | 3.90e-09 | 18.8% | 2.2% |
D6
medium
residues 872-926_1005-1079
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF07925.16 best | RdRP_5 | 59.0 | 2.40e-16 | 62.3% | 5.7% |
| PF07925.16 | RdRP_5 | 32.8 | 2.00e-08 | 43.9% | 3.1% |
ECOD (1)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1697853 | 4962.1.1.2 ↗ | alpha complex topology › C-terminal additional helical subdomain in reovirus polymerase lambda3 › C-terminal additional helical subdomain in reovirus polymerase lambda3 › C-terminal additional helical subdomain in reovirus polymerase lambda3 › RdRP_5 | 0.83 | 71.0 | 4.92e-01 | 88.5% | 92.1% |