large_T_antigen

Euk-Vir

Trichodysplasia_spinulosa-associated_polyomavirus

large_T_antigen__YP_003800007__Trichodysplasia_spinulosa-associated_polyomavirus__862909

Identity

82.8 mean pLDDT

Shotokuvirae› Cossaviricota› Papovaviricetes› Sepolyvirales› Polyomaviridae› Alphapolyomavirus› Trichodysplasia_spinulosa-associated_polyomavirus

TaxID: 862909

View cluster (129 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-69

PDB

Domain cluster: rep: small_T_antigen__YP_007346980__Betapolyomavirus_ptedavyi__1891773__D7-77

D2 high residues 192-303

PDB

Domain cluster: rep: large_T_antigen__YP_009115503__Adelie_penguin_polyomavirus__1590650__D167-268

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02217.23 best	T_Ag_DNA_bind	113.8	6.80e-33	79.5%	93.6%

D3 high residues 318-402

PDB

Domain cluster: rep: ORF01L__YP_009252373__Marbled_eel_polyomavirus__1662286__D415-505

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06431.17 best	Polyoma_lg_T_C	85.0	7.20e-24	100.0%	19.7%

D4 high residues 405-532_588-666

PDB

Domain cluster: rep: large_T_antigen__YP_007195293__Alphapolyomavirus_septipanos__1891739__D391-454_582-665

Pfam (3)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06431.17 best	Polyoma_lg_T_C	142.5	2.60e-41	62.3%	30.9%
PF00519.24	PPV_E1_C	28.1	1.60e-06	44.0%	14.9%
PF06431.17	Polyoma_lg_T_C	56.6	3.10e-15	37.7%	18.0%

D5 medium residues 533-587

PDB

Domain cluster: rep: large_T-antigen__YP_009508818__Erythrura_gouldiae_polyomavirus_1__2169903__D490-559

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06431.17 best	Polyoma_lg_T_C	87.4	1.30e-24	100.0%	13.0%