large_T_antigen

Euk-Vir

Alphapolyomavirus_tertichlopygerythrus

large_T_antigen__YP_009111375__Alphapolyomavirus_tertichlopygerythrus__1891720

Identity

79.3 mean pLDDT

Shotokuvirae› Cossaviricota› Papovaviricetes› Sepolyvirales› Polyomaviridae› Alphapolyomavirus› Alphapolyomavirus_tertichlopygerythrus

TaxID: 1891720

View cluster (129 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-69

PDB

Domain cluster: rep: small_T_antigen__YP_007346980__Betapolyomavirus_ptedavyi__1891773__D7-77

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00226.37 best	DnaJ	28.0	2.60e-06	87.3%	65.1%

D2 high residues 209-316

PDB

Domain cluster: rep: large_T_antigen__YP_009115503__Adelie_penguin_polyomavirus__1590650__D167-268

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02217.23 best	T_Ag_DNA_bind	106.3	1.50e-30	82.4%	89.4%

D3 high residues 334-418

PDB

Domain cluster: rep: ORF01L__YP_009252373__Marbled_eel_polyomavirus__1662286__D415-505

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06431.17 best	Polyoma_lg_T_C	91.9	5.70e-26	100.0%	19.7%

D4 medium residues 420-479_612-696

PDB

Domain cluster: rep: large_T_antigen__YP_007195293__Alphapolyomavirus_septipanos__1891739__D391-454_582-665

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06431.17 best	Polyoma_lg_T_C	69.9	2.70e-19	63.4%	18.5%
PF06431.17	Polyoma_lg_T_C	25.2	1.10e-05	42.8%	14.9%

D5 medium residues 480-611

PDB

Domain cluster: rep: MN062720.1__QDP45567.1__SEA_FUZZBUSTER_83__00083__D568-722_747-764

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06431.17 best	Polyoma_lg_T_C	173.1	1.30e-50	100.0%	31.6%
PF00519.24	PPV_E1_C	32.4	7.80e-08	88.6%	34.6%