large_T_antigen

Euk-Vir

Bat_polyomavirus_6c

large_T_antigen__YP_009129312__Bat_polyomavirus_6c__1623688

Identity

83.6 mean pLDDT

Shotokuvirae› Cossaviricota› Papovaviricetes› Sepolyvirales› Polyomaviridae› Betapolyomavirus› Bat_polyomavirus_6c

TaxID: 1623688

View cluster (129 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-68

PDB

Domain cluster: rep: small_T_antigen__YP_007346980__Betapolyomavirus_ptedavyi__1891773__D7-77

D2 high residues 163-282

PDB

Domain cluster: rep: large_T_antigen__YP_009115503__Adelie_penguin_polyomavirus__1590650__D167-268

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02217.23 best	T_Ag_DNA_bind	99.0	2.80e-28	76.7%	92.5%

D3 high residues 294-378

PDB

Domain cluster: rep: ORF01L__YP_009252373__Marbled_eel_polyomavirus__1662286__D415-505

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06431.17 best	Polyoma_lg_T_C	106.0	3.00e-30	100.0%	20.1%

D4 medium residues 381-423_576-651

PDB

Domain cluster: rep: large_T_antigen__YP_009115503__Adelie_penguin_polyomavirus__1590650__D403-422_572-647

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06431.17 best	Polyoma_lg_T_C	41.6	1.10e-10	63.0%	17.0%
PF06431.17	Polyoma_lg_T_C	32.9	4.90e-08	40.3%	10.5%

D5 medium residues 424-575

PDB

Domain cluster: rep: MN062720.1__QDP45567.1__SEA_FUZZBUSTER_83__00083__D568-722_747-764

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06431.17 best	Polyoma_lg_T_C	241.0	3.30e-71	99.3%	34.8%
PF00519.24	PPV_E1_C	33.2	4.50e-08	98.7%	38.8%