large_T_antigen

Euk-Vir

Betapolyomavirus_lepweddellii

large_T_antigen__YP_009329839__Betapolyomavirus_lepweddellii__1925019

Identity

84.6 mean pLDDT

Shotokuvirae› Cossaviricota› Papovaviricetes› Sepolyvirales› Polyomaviridae› Betapolyomavirus› Betapolyomavirus_lepweddellii

TaxID: 1925019

View cluster (129 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-68

PDB

Domain cluster: rep: small_T_antigen__YP_007346980__Betapolyomavirus_ptedavyi__1891773__D7-77

D2 high residues 146-252

PDB

Domain cluster: rep: large_T_antigen__YP_009115503__Adelie_penguin_polyomavirus__1590650__D167-268

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02217.23 best	T_Ag_DNA_bind	88.2	6.40e-25	84.1%	92.5%

D3 high residues 270-354

PDB

Domain cluster: rep: ORF01L__YP_009252373__Marbled_eel_polyomavirus__1662286__D415-505

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06431.17 best	Polyoma_lg_T_C	87.0	1.80e-24	100.0%	19.7%

D4 medium residues 356-444_487-506_546-628

PDB

Domain cluster: rep: large_T_antigen__YP_007195293__Alphapolyomavirus_septipanos__1891739__D391-454_582-665

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06431.17 best	Polyoma_lg_T_C	119.0	3.60e-34	47.9%	21.3%
PF06431.17	Polyoma_lg_T_C	73.9	1.70e-20	43.8%	19.4%

D5 medium residues 445-486_507-545

PDB

Domain cluster: rep: large_T_antigen__YP_009091977__Sea_otter_polyomavirus_1__1552409__D447-492_518-542

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06431.17 best	Polyoma_lg_T_C	49.8	3.60e-13	55.6%	10.1%
PF06431.17	Polyoma_lg_T_C	53.1	3.50e-14	55.6%	9.6%