large_T_antigen

Euk-Vir

Giant_panda_polyomavirus

large_T_antigen__YP_009389283__Giant_panda_polyomavirus__2016463

Identity

80.1 mean pLDDT

Shotokuvirae› Cossaviricota› Papovaviricetes› Sepolyvirales› Polyomaviridae› Deltapolyomavirus› Giant_panda_polyomavirus

TaxID: 2016463

View cluster (129 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 217-326

PDB

Domain cluster: rep: large_T_antigen__YP_009115503__Adelie_penguin_polyomavirus__1590650__D167-268

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02217.23 best	T_Ag_DNA_bind	102.3	2.60e-29	80.0%	93.6%

D2 high residues 350-429

PDB

Domain cluster: rep: ORF01L__YP_009252373__Marbled_eel_polyomavirus__1662286__D415-505

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06431.17 best	Polyoma_lg_T_C	72.6	4.40e-20	100.0%	18.9%

D3 medium residues 1-70

PDB

Domain cluster: rep: small_T_antigen__YP_007346980__Betapolyomavirus_ptedavyi__1891773__D7-77

D4 medium residues 431-483_615-705

PDB

Domain cluster: rep: large_T_antigen__YP_007195293__Alphapolyomavirus_septipanos__1891739__D391-454_582-665

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06431.17 best	Polyoma_lg_T_C	85.4	5.50e-24	66.7%	19.7%
PF06431.17	Polyoma_lg_T_C	30.0	3.50e-07	37.5%	12.5%

D5 medium residues 484-614

PDB

Domain cluster: rep: MN062720.1__QDP45567.1__SEA_FUZZBUSTER_83__00083__D568-722_747-764

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06431.17 best	Polyoma_lg_T_C	220.7	4.70e-65	100.0%	31.2%
PF00519.24	PPV_E1_C	26.7	4.20e-06	93.9%	36.0%