large_T_antigen

Euk-Vir

Bat_polyomavirus_5b

large_T_antigen__YP_009507646__Bat_polyomavirus_5b__1623684

Identity

84.8 mean pLDDT

Shotokuvirae› Cossaviricota› Papovaviricetes› Sepolyvirales› Polyomaviridae› Alphapolyomavirus› Bat_polyomavirus_5b

TaxID: 1623684

View cluster (129 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-66

PDB

Domain cluster: rep: small_T_antigen__YP_007346980__Betapolyomavirus_ptedavyi__1891773__D7-77

D2 high residues 131-240

PDB

Domain cluster: rep: large_T_antigen__YP_009115503__Adelie_penguin_polyomavirus__1590650__D167-268

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02217.23 best	T_Ag_DNA_bind	118.1	3.00e-34	80.9%	94.7%

D3 high residues 257-340

PDB

Domain cluster: rep: ORF01L__YP_009252373__Marbled_eel_polyomavirus__1662286__D415-505

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06431.17 best	Polyoma_lg_T_C	88.2	7.60e-25	100.0%	19.4%

D4 medium residues 341-382_535-613

PDB

Domain cluster: rep: large_T_antigen__YP_007195293__Alphapolyomavirus_septipanos__1891739__D391-454_582-665

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06431.17 best	Polyoma_lg_T_C	51.1	1.40e-13	65.3%	17.3%
PF06431.17	Polyoma_lg_T_C	30.8	2.10e-07	35.5%	10.5%

D5 medium residues 383-534

PDB

Domain cluster: rep: large_T_antigen__YP_009553187__Philantomba_monticola_polyomavirus_1__2170411__D436-450_495-593

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06431.17 best	Polyoma_lg_T_C	221.3	3.00e-65	100.0%	36.0%
PF00519.24	PPV_E1_C	29.5	6.10e-07	97.4%	41.5%