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large_T_antigen

Euk-Vir

Saimiri_sciureus_polyomavirus_1

large_T_antigen__YP_009507669__Saimiri_sciureus_polyomavirus_1__1236410

Identity

Accession:
YP_009507669 ↗
Protein ID:
large_T_antigen
Kingdom:
euk

Quality

84.1 mean pLDDT

Taxonomy

Shotokuvirae› Cossaviricota› Papovaviricetes› Sepolyvirales› Polyomaviridae› Betapolyomavirus› Saimiri_sciureus_polyomavirus_1

TaxID: 1236410

Cluster

View cluster (129 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-67
PDB
Domain cluster: rep: small_T_antigen__YP_007346980__Betapolyomavirus_ptedavyi__1891773__D7-77
D2 high residues 153-267
PDB
Domain cluster: rep: large_T_antigen__YP_009115503__Adelie_penguin_polyomavirus__1590650__D167-268
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02217.23 best T_Ag_DNA_bind 105.0 3.60e-30 74.8% 90.4%
D3 high residues 278-362
PDB
Domain cluster: rep: ORF01L__YP_009252373__Marbled_eel_polyomavirus__1662286__D415-505
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF06431.17 best Polyoma_lg_T_C 108.3 6.40e-31 100.0% 20.1%
D4 medium residues 364-424
PDB
Domain cluster: rep: large_T_antigen__YP_010087549__Deltapolyomavirus_canis__2170403__D425-483
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF06431.17 best Polyoma_lg_T_C 51.9 8.40e-14 100.0% 13.9%
D5 medium residues 425-556
PDB
Domain cluster: rep: MN062720.1__QDP45567.1__SEA_FUZZBUSTER_83__00083__D568-722_747-764
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF06431.17 best Polyoma_lg_T_C 234.2 3.80e-69 100.0% 31.9%
D6 medium residues 557-637
PDB
Domain cluster: rep: large_T_antigen__YP_009115503__Adelie_penguin_polyomavirus__1590650__D403-422_572-647
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF06431.17 best Polyoma_lg_T_C 57.9 1.30e-15 98.8% 18.5%