large_T_antigen

Euk-Vir

Myocastor_coypus_polyomavirus_1

large_T_antigen__YP_009552015__Myocastor_coypus_polyomavirus_1__2304056

Identity

86.7 mean pLDDT

Shotokuvirae› Cossaviricota› Papovaviricetes› Sepolyvirales› Polyomaviridae› Myocastor_coypus_polyomavirus_1

TaxID: 2304056

View cluster (129 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-71

PDB

Domain cluster: rep: small_T_antigen__YP_007346980__Betapolyomavirus_ptedavyi__1891773__D7-77

D2 high residues 125-235

PDB

Domain cluster: rep: large_T_antigen__YP_009115503__Adelie_penguin_polyomavirus__1590650__D167-268

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02217.23 best	T_Ag_DNA_bind	106.4	1.40e-30	79.3%	92.5%

D3 high residues 251-335

PDB

Domain cluster: rep: ORF01L__YP_009252373__Marbled_eel_polyomavirus__1662286__D415-505

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06431.17 best	Polyoma_lg_T_C	91.8	6.40e-26	100.0%	20.1%

D4 medium residues 362-375_528-605

PDB

Domain cluster: rep: large_T_antigen__YP_009158866__Rattus_norvegicus_polyomavirus_1__1679933__D688-761

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06431.17 best	Polyoma_lg_T_C	58.6	7.50e-16	84.8%	17.3%

D5 medium residues 376-527

PDB

Domain cluster: rep: MN062720.1__QDP45567.1__SEA_FUZZBUSTER_83__00083__D568-722_747-764

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06431.17 best	Polyoma_lg_T_C	218.6	2.10e-64	100.0%	36.0%
PF00519.24	PPV_E1_C	36.2	5.30e-09	98.0%	39.5%