large_T_antigen

Euk-Vir

Sus_scrofa_polyomavirus_1

large_T_antigen__YP_009552103__Sus_scrofa_polyomavirus_1__1680894

Identity

75.2 mean pLDDT

Shotokuvirae› Cossaviricota› Papovaviricetes› Sepolyvirales› Polyomaviridae› Alphapolyomavirus› Sus_scrofa_polyomavirus_1

TaxID: 1680894

View cluster (129 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-71

PDB

Domain cluster: rep: small_T_antigen__YP_007346980__Betapolyomavirus_ptedavyi__1891773__D7-77

D2 high residues 278-398

PDB

Domain cluster: rep: large_T_antigen__YP_009115503__Adelie_penguin_polyomavirus__1590650__D167-268

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02217.23 best	T_Ag_DNA_bind	95.8	2.70e-27	77.7%	93.6%

D3 high residues 410-492

PDB

Domain cluster: rep: ORF01L__YP_009252373__Marbled_eel_polyomavirus__1662286__D415-505

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06431.17 best	Polyoma_lg_T_C	55.1	8.90e-15	100.0%	19.7%

D4 medium residues 599-668

PDB

Domain cluster: rep: large_T-antigen__YP_009508818__Erythrura_gouldiae_polyomavirus_1__2169903__D490-559

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06431.17 best	Polyoma_lg_T_C	97.7	1.10e-27	100.0%	16.8%

D5 medium residues 669-772

PDB

Domain cluster: rep: large_T_antigen__YP_009115503__Adelie_penguin_polyomavirus__1590650__D403-422_572-647

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06431.17 best	Polyoma_lg_T_C	76.9	2.10e-21	100.0%	24.2%