large_T_antigen

Euk-Vir

Akodon_montensis_polyomavirus

large_T_antigen__YP_009553226__Akodon_montensis_polyomavirus__2163422

Identity

84.6 mean pLDDT

Shotokuvirae› Cossaviricota› Papovaviricetes› Sepolyvirales› Polyomaviridae› Akodon_montensis_polyomavirus

TaxID: 2163422

View cluster (129 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-89

PDB

Domain cluster: rep: small_T_antigen__YP_007346980__Betapolyomavirus_ptedavyi__1891773__D7-77

D2 high residues 210-314

PDB

Domain cluster: rep: large_T_antigen__YP_009115503__Adelie_penguin_polyomavirus__1590650__D167-268

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02217.23 best	T_Ag_DNA_bind	86.8	1.70e-24	68.6%	75.5%

D3 high residues 324-408

PDB

Domain cluster: rep: ORF01L__YP_009252373__Marbled_eel_polyomavirus__1662286__D415-505

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06431.17 best	Polyoma_lg_T_C	86.1	3.40e-24	100.0%	19.4%

D4 medium residues 410-449_601-677

PDB

Domain cluster: rep: large_T_antigen__YP_009115503__Adelie_penguin_polyomavirus__1590650__D403-422_572-647

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06431.17 best	Polyoma_lg_T_C	57.4	1.80e-15	65.8%	17.8%

D5 medium residues 450-498_568-600

PDB

Domain cluster: rep: large_T_antigen__YP_009111370__Yellow_baboon_polyomavirus_2__1286214__D421-460_527-553

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06431.17 best	Polyoma_lg_T_C	60.4	2.20e-16	62.2%	11.3%
PF06431.17	Polyoma_lg_T_C	39.7	4.20e-10	42.7%	7.7%

D6 medium residues 499-567

PDB

Domain cluster: rep: large_T_antigen__YP_009111370__Yellow_baboon_polyomavirus_2__1286214__D461-526

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06431.17 best	Polyoma_lg_T_C	102.9	2.80e-29	100.0%	16.8%