large_T_antigen

Euk-Vir

Alphapolyomavirus_aflavicollis

large_T_antigen__YP_010087526__Alphapolyomavirus_aflavicollis__2170408

Identity

78.6 mean pLDDT

Shotokuvirae› Cossaviricota› Papovaviricetes› Sepolyvirales› Polyomaviridae› Alphapolyomavirus› Alphapolyomavirus_aflavicollis

TaxID: 2170408

View cluster (129 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-69

PDB

Domain cluster: rep: small_T_antigen__YP_007346980__Betapolyomavirus_ptedavyi__1891773__D7-77

D2 high residues 270-387

PDB

Domain cluster: rep: large_T_antigen__YP_009115503__Adelie_penguin_polyomavirus__1590650__D167-268

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02217.23 best	T_Ag_DNA_bind	111.8	2.80e-32	75.4%	94.7%

D3 high residues 399-485

PDB

Domain cluster: rep: ORF01L__YP_009252373__Marbled_eel_polyomavirus__1662286__D415-505

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06431.17 best	Polyoma_lg_T_C	80.6	1.60e-22	100.0%	20.1%

D4 medium residues 504-524_679-757

PDB

Domain cluster: rep: large_T_antigen__YP_009158866__Rattus_norvegicus_polyomavirus_1__1679933__D688-761

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06431.17 best	Polyoma_lg_T_C	30.3	2.90e-07	79.0%	17.0%

D5 medium residues 525-678

PDB

Domain cluster: rep: MN062720.1__QDP45567.1__SEA_FUZZBUSTER_83__00083__D568-722_747-764

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06431.17 best	Polyoma_lg_T_C	204.3	4.40e-60	99.4%	34.8%
PF00519.24	PPV_E1_C	32.9	5.30e-08	93.5%	38.8%