large_T_antigen

Euk-Vir

Mastomys_natalensis_polyomavirus_3

large_T_antigen__YP_010087844__Mastomys_natalensis_polyomavirus_3__2662314

Identity

76.1 mean pLDDT

Shotokuvirae› Cossaviricota› Papovaviricetes› Sepolyvirales› Polyomaviridae› Alphapolyomavirus› Mastomys_natalensis_polyomavirus_3

TaxID: 2662314

View cluster (129 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-66

PDB

Domain cluster: rep: small_T_antigen__YP_007346980__Betapolyomavirus_ptedavyi__1891773__D7-77

D2 high residues 302-415

PDB

Domain cluster: rep: large_T_antigen__YP_009115503__Adelie_penguin_polyomavirus__1590650__D167-268

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02217.23 best	T_Ag_DNA_bind	115.1	2.60e-33	76.3%	93.6%

D3 high residues 427-513

PDB

Domain cluster: rep: ORF01L__YP_009252373__Marbled_eel_polyomavirus__1662286__D415-505

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06431.17 best	Polyoma_lg_T_C	85.4	5.70e-24	100.0%	19.9%

D4 medium residues 515-553_706-784

PDB

Domain cluster: rep: large_T_antigen__YP_007195293__Alphapolyomavirus_septipanos__1891739__D391-454_582-665

D5 medium residues 554-705

PDB

Domain cluster: rep: MN062720.1__QDP45567.1__SEA_FUZZBUSTER_83__00083__D568-722_747-764

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06431.17 best	Polyoma_lg_T_C	202.3	1.80e-59	98.0%	34.8%
PF00519.24	PPV_E1_C	36.0	6.30e-09	96.0%	41.9%