late_expression_factor_8

Euk-Vir

Erinnyis_ello_granulovirus

late_expression_factor_8__YP_009091961__Erinnyis_ello_granulovirus__307444

Identity

75.0 mean pLDDT

Naldaviricetes› Lefavirales› Baculoviridae› Betabaculovirus› Erinnyis_ello_granulovirus

TaxID: 307444

View cluster (46 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-96_219-305

PDB

Domain cluster: rep: lef-8__YP_009513164__Agrotis_segetum_granulovirus__10464__D3-99_217-314

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04941.18 best	LEF-8	114.4	7.40e-33	51.9%	13.6%
PF04941.18	LEF-8	81.2	8.10e-23	48.6%	12.3%

D2 high residues 552-596_717-819

PDB

Domain cluster: rep: KU935715.1__AND75470.1__ME3_309__00309__D264-326_420-534

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04941.18 best	LEF-8	69.4	3.00e-19	31.8%	6.2%
PF04941.18	LEF-8	41.9	6.30e-11	20.9%	4.1%

D3 high residues 603-707

PDB

Domain cluster: rep: late_expression_factor-8__YP_025188__Neodiprion_sertifer_nucleopolyhedrovirus__111874__D585-690

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04941.18 best	LEF-8	102.6	2.60e-29	100.0%	13.7%

D4 medium residues 99-202

PDB

Domain cluster: rep: LEF-8__YP_009345850__Mythimna_unipuncta_granulovirus_B__2169746__D102-211

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04941.18 best	LEF-8	169.1	2.10e-49	100.0%	14.0%

D5 medium residues 396-497

PDB

Domain cluster: rep: Late_expression_facto_8__YP_009666455__Lonomia_obliqua_multiple_nucleopolyhedrovirus__134394__D385-515

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04941.18 best	LEF-8	110.9	8.30e-32	99.0%	12.0%

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1tifA00	3.10.20.80	Alpha Beta › Roll › Ubiquitin-like (UB roll) › Translation initiation factor 3 (IF-3), N-terminal domain	0.54	32.0	3.57e-01	77.5%	76.3%
3gs9A02	3.55.50.40	Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold ›	0.51	31.0	3.26e-01	74.5%	66.3%
2m1mA00	3.10.20.90	Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1	0.51	37.0	3.71e-01	77.5%	93.5%

ECOD (4)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3668077	221.2.1.1 ↗	a+b two layers › beta-Grasp › IF3-N › IF3-N › IF3_N	0.57	33.0	3.75e-01	77.5%	77.3%
4031525	221.2.1.1 ↗	a+b two layers › beta-Grasp › IF3-N › IF3-N › IF3_N	0.55	28.0	3.59e-01	71.6%	89.1%
4500967	221.2.1.1 ↗	a+b two layers › beta-Grasp › IF3-N › IF3-N › IF3_N	0.54	31.0	3.45e-01	77.5%	71.2%
4108510	221.2.1.1 ↗	a+b two layers › beta-Grasp › IF3-N › IF3-N › IF3_N	0.51	31.0	3.38e-01	78.4%	73.8%