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late_transcription_factor_VLTF-4
Euk-VirSheeppox_virus
late_transcription_factor_VLTF-4__NP_659648__Sheeppox_virus__10266
Identity
- Accession:
- NP_659648 ↗
- Protein ID:
- late_transcription_factor_VLTF-4
- Kingdom:
- euk
Quality
63.0
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Pokkesviricetes›
Chitovirales›
Poxviridae›
Capripoxvirus›
Sheeppox_virus
TaxID: 10266
Cluster
View cluster (13 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 164-218
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03286.21 best | Pox_Ag35 | 80.0 | 3.90e-22 | 100.0% | 27.2% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3k59A06 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.79 | 56.0 | 5.97e-01 | 80.0% | 89.4% |
| 1d2mA03 | 6.10.140.240 | Special › Helix non-globular › Helix Hairpins › | 0.67 | 55.0 | 5.22e-01 | 92.7% | 77.3% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3595966 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.74 | 58.0 | 5.37e-01 | 83.6% | 83.8% |
| 3260420 | 328.7.1.1 ↗ | a+b two layers › IF3-like › Smr domain › Smr domain › Smr | 0.62 | 48.0 | 3.66e-01 | 85.5% | 47.0% |
| 3595149 | 4970.1.1.0 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I | 0.58 | 45.0 | 4.44e-01 | 92.7% | 98.3% |