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leader_protease_1
Euk-VirRose_leaf_rosette-associated_virus
leader_protease_1__YP_009059063__Rose_leaf_rosette-associated_virus__1543207
Identity
- Accession:
- YP_009059063 ↗
- Protein ID:
- leader_protease_1
- Kingdom:
- euk
Quality
51.0
mean pLDDT
Taxonomy
Orthornavirae›
Kitrinoviricota›
Alsuviricetes›
Martellivirales›
Closteroviridae›
Closterovirus›
Rose_leaf_rosette-associated_virus
TaxID: 1543207
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 235-348
Domain cluster:
rep: leader_protease_2__YP_762677__Strawberry_chlorotic_fleck-associated_virus__399314__D23-110
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1lomA00 | 2.30.60.10 | Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N | 0.58 | 27.0 | 2.85e-01 | 82.5% | 46.5% |
| 1nbwA04 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.54 | 37.0 | 3.59e-01 | 71.1% | 86.4% |
| 2eigA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 37.0 | 2.98e-01 | 75.4% | 98.3% |
| 5iroD00 | 2.60.40.3530 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 41.0 | 4.32e-01 | 87.7% | 96.1% |
| 2g8yA02 | 3.30.1370.60 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Malate/L-lactate/L-sulpholactate dehydrogenase, NADPH binding domain | 0.51 | 37.0 | 3.04e-01 | 76.3% | 92.7% |
| 3uoaB02 | 2.60.40.3360 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 37.0 | 3.48e-01 | 74.6% | 89.7% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4931002 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.54 | 37.0 | 4.18e-01 | 70.2% | 98.8% |
| 4303869 | 218.1.1.8 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA | 0.53 | 31.0 | 3.49e-01 | 92.1% | 73.3% |
| 4036940 | 218.1.1.8 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA | 0.52 | 31.0 | 3.40e-01 | 92.1% | 71.6% |
| 3699300 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.51 | 37.0 | 2.49e-01 | 77.2% | 25.3% |
| 3968513 | 10.1.1.27 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Alginate_lyase2 | 0.50 | 35.0 | 2.82e-01 | 71.1% | 44.3% |
| 5053926 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.50 | 33.0 | 3.84e-01 | 90.4% | 95.0% |