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leader_protein
Euk-VirHuman_coronavirus_OC43
leader_protein__YP_009924319__Human_coronavirus_OC43__31631
Identity
- Accession:
- YP_009924319 ↗
- Protein ID:
- leader_protein
- Kingdom:
- euk
Quality
62.1
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Pisoniviricetes›
Nidovirales›
Coronaviridae›
Betacoronavirus›
Human_coronavirus_OC43
TaxID: 31631
Cluster
View cluster (13 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 57-193
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF11963.14 best | B-CoV_A_NSP1 | 247.5 | 3.40e-73 | 100.0% | 38.6% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ffyA00 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.55 | 41.0 | 4.40e-01 | 87.6% | 94.6% |
| 1wyzA02 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.54 | 40.0 | 4.38e-01 | 86.9% | 97.3% |
| 1ve2B02 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.52 | 38.0 | 4.14e-01 | 99.3% | 93.0% |
| 1npyA01 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.50 | 27.0 | 3.10e-01 | 86.1% | 69.0% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4861314 | 4356.1.1.1 ↗ | beta complex topology › Coronavirus nsp1 › Coronavirus nsp1 › Coronavirus nsp1 › bCoV_NSP1 | 0.81 | 63.0 | 6.58e-01 | 100.0% | 86.7% |
| 4989859 | 1137.1.1.0 ↗ | a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain | 0.57 | 39.0 | 4.35e-01 | 87.6% | 92.4% |
| 5022617 | 1137.1.1.0 ↗ | a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain | 0.55 | 37.0 | 4.22e-01 | 87.6% | 94.0% |
| 3781299 | 323.1.1.14 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AATase | 0.54 | 38.0 | 3.19e-01 | 72.3% | 78.8% |
| 3955954 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.53 | 37.0 | 3.05e-01 | 71.5% | 80.0% |
| 4123708 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.53 | 37.0 | 3.11e-01 | 73.0% | 80.8% |
| 4327532 | 1137.1.1.0 ↗ | a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain | 0.52 | 39.0 | 4.10e-01 | 86.1% | 89.2% |
| 4386724 | 1137.1.1.0 ↗ | a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain | 0.52 | 38.0 | 4.17e-01 | 84.7% | 96.4% |
| 4316382 | 1137.1.1.0 ↗ | a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain | 0.52 | 39.0 | 4.26e-01 | 87.6% | 99.1% |
| 4019215 | 4.1.1.303 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus | 0.52 | 28.0 | 3.64e-01 | 76.6% | 100.0% |
| 5042786 | 328.9.1.0 ↗ | a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain | 0.52 | 28.0 | 3.56e-01 | 82.5% | 98.6% |
| 5063572 | 328.3.1.0 ↗ | a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain | 0.50 | 27.0 | 3.45e-01 | 81.0% | 97.1% |
| 3582700 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.50 | 36.0 | 2.84e-01 | 73.7% | 82.4% |