←Back to structures
lef-12
Euk-VirCryptophlebia_peltastica_nucleopolyhedrovirus
lef-12__YP_010086905__Cryptophlebia_peltastica_nucleopolyhedrovirus__2304025
Identity
- Accession:
- YP_010086905 ↗
- Protein ID:
- lef-12
- Kingdom:
- euk
Quality
76.1
mean pLDDT
Taxonomy
Naldaviricetes›
Lefavirales›
Baculoviridae›
Alphabaculovirus›
Cryptophlebia_peltastica_nucleopolyhedrovirus
TaxID: 2304025
Cluster
View cluster (18 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-207
Domain cluster:
rep: Late_expression_factor_12__YP_009165636__Perigonia_lusca_single_nucleopolyhedrovirus__1675865__D2-176
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06256.19 best | Nucleo_LEF-12 | 205.6 | 8.20e-61 | 89.8% | 99.5% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3wfoA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.64 | 48.0 | 5.33e-01 | 92.3% | 95.5% |
| 2vh2B01 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.53 | 18.0 | 2.87e-01 | 100.0% | 77.8% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3211799 | 316.1.1.40 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_7 | 0.68 | 56.0 | 5.37e-01 | 86.7% | 98.2% |
| 3755044 | 316.1.1.40 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_7 | 0.63 | 56.0 | 5.40e-01 | 92.3% | 98.1% |
| 4982092 | 316.1.1.11 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › GrpB | 0.63 | 50.0 | 5.43e-01 | 95.9% | 97.6% |
| 4962252 | 316.1.1.41 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DUF6036 | 0.63 | 49.0 | 4.89e-01 | 94.4% | 79.5% |
| 4933931 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.62 | 48.0 | 5.10e-01 | 92.9% | 92.4% |
| 3640795 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.62 | 56.0 | 5.47e-01 | 98.5% | 93.0% |
| 3274187 | 316.1.1.11 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › GrpB | 0.61 | 49.0 | 5.27e-01 | 95.9% | 97.1% |
| 4927191 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.60 | 47.0 | 5.03e-01 | 94.4% | 95.8% |
| 4379266 | 316.1.1.1 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PolyA_pol | 0.60 | 49.0 | 5.28e-01 | 100.0% | 100.0% |
| 5040911 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.58 | 49.0 | 5.14e-01 | 94.4% | 98.9% |
| 5694 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.58 | 25.0 | 3.81e-01 | 71.9% | 98.7% |
| 4945608 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.57 | 48.0 | 5.07e-01 | 94.4% | 100.0% |
| 5076537 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.57 | 49.0 | 4.97e-01 | 94.9% | 93.7% |
| 2552720 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.57 | 24.0 | 3.70e-01 | 71.4% | 97.4% |
| 4978492 | 316.1.1.39 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DUF2204 | 0.56 | 49.0 | 4.92e-01 | 94.9% | 93.3% |
| 4993673 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.56 | 49.0 | 5.06e-01 | 94.9% | 100.0% |
| 3723794 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.55 | 49.0 | 4.70e-01 | 95.4% | 97.8% |
| 3638659 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.55 | 48.0 | 4.57e-01 | 94.9% | 100.0% |
| 5074217 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.54 | 48.0 | 4.91e-01 | 95.4% | 100.0% |
| 3283216 | 211.1.1.1 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase | 0.54 | 24.0 | 3.55e-01 | 80.6% | 96.4% |
| 5079626 | 316.1.1.18 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › AbiEii | 0.52 | 47.0 | 4.49e-01 | 97.4% | 96.0% |