lef-5

Euk-Vir

Sucra_jujuba_nucleopolyhedrovirus

lef-5__YP_009186773__Sucra_jujuba_nucleopolyhedrovirus__1563660

Identity

70.5 mean pLDDT

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Sucra_jujuba_nucleopolyhedrovirus

TaxID: 1563660

View cluster (46 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 38-95

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04838.19 best	Baculo_LEF5	88.8	5.40e-25	94.8%	35.0%

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1x4pA00	1.10.10.790	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Surp module	0.64	49.0	4.81e-01	94.8%	77.3%
4ga4A01	1.20.970.10	Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C	0.61	46.0	4.49e-01	93.1%	73.1%
3lomA00	1.10.600.10	Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase	0.56	47.0	3.09e-01	100.0%	99.7%
4evfA04	1.10.220.10	Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin	0.53	43.0	4.11e-01	93.1%	98.6%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3808219	109.3.1.2 ↗	alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2	0.60	51.0	3.77e-01	100.0%	77.6%
138138	141.1.1.1 ↗	alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › polyprenyl_synt	0.56	47.0	3.11e-01	100.0%	100.0%
3518443	145.1.1.0 ↗	alpha arrays › F-box domain › F-box domain › F-box domain	0.54	40.0	3.45e-01	84.5%	49.5%

D2 medium residues 96-197

PDB

Domain cluster: rep: LEF-5__YP_009250065__Urbanus_proteus_nucleopolyhedrovirus__1675866__D84-197

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04838.19 best	Baculo_LEF5	154.3	3.90e-45	100.0%	65.0%