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lef-8

Euk-Vir

Sucra_jujuba_nucleopolyhedrovirus

lef-8__YP_009186724__Sucra_jujuba_nucleopolyhedrovirus__1563660

Identity

Accession:: YP_009186724 ↗
Protein ID:: lef-8
Kingdom:: euk

Quality

76.2 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Sucra_jujuba_nucleopolyhedrovirus

TaxID: 1563660

Cluster

View cluster (46 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 105-208

PDB

Domain cluster: rep: LEF-8__YP_009345850__Mythimna_unipuncta_granulovirus_B__2169746__D102-211

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04941.18 best	LEF-8	153.4	1.20e-44	100.0%	14.0%

D2 high residues 631-718_732-746

PDB

Domain cluster: rep: late_expression_factor-8__YP_025188__Neodiprion_sertifer_nucleopolyhedrovirus__111874__D585-690

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04941.18 best	LEF-8	96.3	2.20e-27	100.0%	11.9%

D3 medium residues 1-98_228-246_268-310

PDB

Domain cluster: rep: lef-8__YP_009513164__Agrotis_segetum_granulovirus__10464__D3-99_217-314

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04941.18 best	LEF-8	94.2	9.50e-27	64.4%	13.3%
PF04941.18	LEF-8	38.9	5.20e-10	40.6%	9.6%

D4 medium residues 211-227_311-379_484-528

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04941.18 best	LEF-8	102.9	2.20e-29	55.7%	9.7%

CATH (6)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4bd9B01	4.10.410.10	Few Secondary Structures › Irregular › Factor Xa Inhibitor › Pancreatic trypsin inhibitor Kunitz domain	0.64	20.0	2.98e-01	93.9%	59.3%
6q61A00	4.10.410.10	Few Secondary Structures › Irregular › Factor Xa Inhibitor › Pancreatic trypsin inhibitor Kunitz domain	0.61	20.0	2.85e-01	94.7%	55.9%
5yv7A00	4.10.410.10	Few Secondary Structures › Irregular › Factor Xa Inhibitor › Pancreatic trypsin inhibitor Kunitz domain	0.60	20.0	2.97e-01	94.7%	65.0%
1aalB00	4.10.410.10	Few Secondary Structures › Irregular › Factor Xa Inhibitor › Pancreatic trypsin inhibitor Kunitz domain	0.59	19.0	2.80e-01	94.7%	57.9%
4ntwB00	4.10.410.10	Few Secondary Structures › Irregular › Factor Xa Inhibitor › Pancreatic trypsin inhibitor Kunitz domain	0.59	20.0	2.92e-01	93.9%	64.4%
2wcyA01	3.30.60.30	Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 ›	0.50	24.0	3.08e-01	98.5%	78.7%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4928238	375.1.1.0 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related	0.70	24.0	3.66e-01	98.5%	73.6%
3497989	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.52	22.0	3.08e-01	91.6%	81.7%
3242939	384.1.1.0 ↗	few secondary structure elements › BPTI-like › BPTI-like › BPTI-like	0.52	20.0	2.65e-01	94.7%	60.0%

D5 medium residues 380-410_434-483

PDB

Domain cluster: rep: lef-8__YP_010086908__Cryptophlebia_peltastica_nucleopolyhedrovirus__2304025__D365-425_446-456

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04941.18 best	LEF-8	65.8	3.60e-18	100.0%	10.7%

D6 medium residues 595-626_749-842

PDB

D7 medium residues 856-905

PDB