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lef-8

Euk-Vir

Trichoplusia_ni_granulovirus_LBIV-12

lef-8__YP_009506215__Trichoplusia_ni_granulovirus_LBIV-12__1916701

Identity

Accession:
YP_009506215 ↗
Protein ID:
lef-8
Kingdom:
euk

Quality

78.0 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Betabaculovirus› Trichoplusia_ni_granulovirus_LBIV-12

TaxID: 1916701

Cluster

View cluster (46 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-102_226-320
PDB
Domain cluster: rep: lef-8__YP_009513164__Agrotis_segetum_granulovirus__10464__D3-99_217-314
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF04941.18 best LEF-8 89.4 2.60e-25 49.5% 13.4%
PF04941.18 LEF-8 74.3 9.80e-21 49.0% 13.2%
D2 high residues 106-210
PDB
D3 high residues 365-479
PDB
Domain cluster: rep: Late_expression_facto_8__YP_009666455__Lonomia_obliqua_multiple_nucleopolyhedrovirus__134394__D385-515
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04941.18 best LEF-8 113.4 1.50e-32 100.0% 15.6%
D4 high residues 594-706
PDB
Domain cluster: rep: late_expression_factor-8__YP_025188__Neodiprion_sertifer_nucleopolyhedrovirus__111874__D585-690
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04941.18 best LEF-8 88.6 4.60e-25 100.0% 15.5%
D5 medium residues 214-225_321-360
PDB
D6 medium residues 480-540
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04941.18 best LEF-8 55.0 6.60e-15 95.1% 6.2%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4997687 102.2.1.2 ↗ alpha arrays › HhH/H2TH › H2TH › H2TH › Ribosomal_S13 0.53 37.0 3.15e-01 77.0% 88.7%
D7 medium residues 541-593_709-795
PDB
Domain cluster: rep: KU935715.1__AND75470.1__ME3_309__00309__D264-326_420-534
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF04941.18 best LEF-8 69.7 2.40e-19 38.6% 6.9%
PF04941.18 LEF-8 36.5 2.60e-09 22.1% 4.1%
D8 medium residues 796-860
PDB