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lef-8_protein

Euk-Vir

Thysanoplusia_orichalcea_nucleopolyhedrovirus

lef-8_protein__YP_007250457__Thysanoplusia_orichalcea_nucleopolyhedrovirus__101850

Identity

Accession:: YP_007250457 ↗
Protein ID:: lef-8_protein
Kingdom:: euk

Quality

76.5 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Thysanoplusia_orichalcea_nucleopolyhedrovirus

TaxID: 101850

Cluster

View cluster (46 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 107-210

PDB

Domain cluster: rep: LEF-8__YP_009345850__Mythimna_unipuncta_granulovirus_B__2169746__D102-211

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04941.18 best	LEF-8	176.1	1.60e-51	100.0%	14.0%

D2 high residues 374-508

PDB

Domain cluster: rep: Late_expression_facto_8__YP_009666455__Lonomia_obliqua_multiple_nucleopolyhedrovirus__134394__D385-515

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04941.18 best	LEF-8	184.2	5.80e-54	100.0%	17.9%

D3 high residues 604-716

PDB

Domain cluster: rep: late_expression_factor-8__YP_025188__Neodiprion_sertifer_nucleopolyhedrovirus__111874__D585-690

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04941.18 best	LEF-8	149.0	2.50e-43	100.0%	15.3%

D4 medium residues 1-99_230-251_267-299

PDB

Domain cluster: rep: lef-8__YP_009513164__Agrotis_segetum_granulovirus__10464__D3-99_217-314

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04941.18 best	LEF-8	134.0	8.40e-39	73.4%	14.7%
PF04941.18	LEF-8	46.3	3.00e-12	35.7%	6.0%

D5 medium residues 215-229_318-372_511-545

PDB

Domain cluster: representative

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04941.18 best	LEF-8	86.4	2.20e-24	55.2%	7.5%
PF04941.18	LEF-8	48.6	5.80e-13	35.2%	4.8%

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2h6cA01	2.60.120.10	Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls	0.53	36.0	3.46e-01	70.5%	86.0%

D6 medium residues 546-603_717-817

PDB

Domain cluster: rep: KU935715.1__AND75470.1__ME3_309__00309__D264-326_420-534

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04941.18 best	LEF-8	84.4	8.60e-24	37.7%	7.8%
PF04941.18	LEF-8	51.5	7.90e-14	21.4%	4.5%

D7 medium residues 818-877

PDB