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lipid_membrane_protein

Euk-Vir

Anopheles_minimus_iridovirus

lipid_membrane_protein__YP_009021149__Anopheles_minimus_iridovirus__1465751

Identity

Accession:
YP_009021149 ↗
Protein ID:
lipid_membrane_protein
Kingdom:
euk

Quality

52.9 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Iridoviridae› Chloriridovirus› Chloriridovirus_anopheles1

TaxID: 1465751

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 239-332_444-457
PDB
D2 high residues 333-442
PDB
Domain cluster: rep: collagen_repeat_protein_with_BclB_C-terminal_domain__YP_007354075__Acanthamoeba_polyphaga_moumouvirus__1269028__D377-418_430-470
CATH (32)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1z1bA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.67 28.0 3.82e-01 97.3% 75.4%
2ci8A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.66 35.0 4.66e-01 77.3% 100.0%
3gxwC00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.64 36.0 3.82e-01 94.5% 61.0%
2ablA02 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.63 37.0 3.92e-01 90.9% 64.9%
2gsbA01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.62 36.0 4.08e-01 92.7% 75.0%
2ci9B00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.62 35.0 3.65e-01 89.1% 60.0%
1milA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.62 35.0 3.65e-01 90.9% 58.7%
1xa6A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.61 37.0 3.82e-01 89.1% 62.5%
1rjaA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.61 34.0 3.56e-01 75.5% 59.0%
1rpyB00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.59 34.0 3.84e-01 78.2% 72.1%
4nehA01 2.130.10.130 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Integrin alpha, N-terminal 0.59 46.0 3.18e-01 83.6% 42.6%
4fd0A01 2.60.40.3630 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 33.0 3.77e-01 99.1% 78.5%
1i1nA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.56 46.0 3.67e-01 89.1% 80.4%
3d9wA02 2.40.128.150 Mainly Beta › Beta Barrel › Lipocalin › Cysteine proteinases 0.56 37.0 3.86e-01 88.2% 72.5%
1cseI00 3.30.10.10 Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › Trypsin Inhibitor V, subunit A 0.56 29.0 3.63e-01 80.0% 85.7%
3lbfA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 45.0 3.67e-01 90.0% 84.5%
1jg1A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 44.0 3.59e-01 89.1% 80.9%
3us4A00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.54 35.0 3.72e-01 79.1% 74.2%
3dasA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.54 41.0 2.94e-01 91.8% 26.6%
1nrvA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.54 36.0 3.75e-01 85.5% 75.0%
5hy7B02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 43.0 3.18e-01 89.1% 54.8%
6mzoA01 3.40.50.11970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 43.0 4.17e-01 99.1% 77.0%
2hesX00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 43.0 3.16e-01 89.1% 51.6%
3a32A02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.53 38.0 3.52e-01 97.3% 58.9%
2qe8A00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.51 45.0 3.23e-01 98.2% 79.2%
3hfqA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 44.0 3.16e-01 96.4% 36.5%
3bwsA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 38.0 2.83e-01 80.9% 37.5%
1gofA02 2.130.10.80 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Galactose oxidase/kelch, beta-propeller 0.51 43.0 3.03e-01 95.5% 32.7%
3ottB02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 40.0 2.95e-01 85.5% 50.9%
6vp6A03 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.50 43.0 3.13e-01 95.5% 36.8%
3ii7A00 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.50 43.0 3.25e-01 96.4% 43.1%
7c38B01 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.50 43.0 3.17e-01 97.3% 49.1%
ECOD (37)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3947985 3761.1.1.0 ↗ beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related 0.65 36.0 4.41e-01 91.8% 85.7%
4871885 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.63 34.0 3.58e-01 77.3% 56.4%
3595832 375.8.1.0 ↗ few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta 0.62 26.0 3.47e-01 72.7% 72.7%
4993868 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.61 32.0 3.78e-01 73.6% 72.6%
3260335 5.1.4.14 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N 0.59 46.0 3.28e-01 86.4% 49.2%
5046549 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.58 37.0 4.13e-01 82.7% 86.3%
3842643 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.57 37.0 3.56e-01 74.5% 56.8%
4015712 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.57 44.0 3.12e-01 82.7% 49.4%
4413343 2003.6.1.5 ↗ a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › Phos_pyr_kin 0.56 47.0 3.52e-01 90.9% 63.0%
3420257 5.1.2.55 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › FBA_3 0.55 49.0 3.69e-01 97.3% 89.8%
4626423 5.1.4.169 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd 0.55 44.0 3.19e-01 86.4% 51.0%
4639069 2003.1.5.153 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PCMT, Methyltransf_25 0.55 46.0 3.77e-01 90.0% 88.0%
3601275 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 43.0 2.91e-01 83.6% 55.1%
3679992 5.1.4.31 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lgl_C 0.55 44.0 2.68e-01 89.1% 24.0%
3913820 5.1.4.13 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP 0.54 45.0 3.21e-01 94.5% 56.7%
3536906 5.1.3.9 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › OLF 0.53 47.0 3.47e-01 98.2% 69.7%
2527140 5.1.3.9 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › OLF 0.53 46.0 3.54e-01 98.2% 77.6%
None — 0.53 41.0 3.15e-01 85.5% 51.2%
3708813 5.1.4.167 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR19_1st 0.53 42.0 2.97e-01 87.3% 41.3%
3744317 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.53 44.0 3.09e-01 92.7% 43.9%
4583471 5.1.4.6 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 0.53 42.0 3.15e-01 86.4% 50.9%
3918358 5.1.5.102 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › OLF 0.53 45.0 3.49e-01 98.2% 76.6%
4888997 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.53 44.0 3.07e-01 94.5% 30.9%
3544595 5.1.3.9 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › OLF 0.53 45.0 3.40e-01 98.2% 68.9%
3829885 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.52 45.0 3.23e-01 95.5% 38.8%
3595721 5.1.4.169 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd 0.52 44.0 2.99e-01 93.6% 37.3%
3917776 5.1.3.6 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 0.52 45.0 3.26e-01 95.5% 37.7%
3414351 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.51 35.0 3.11e-01 87.3% 45.1%
3935235 5.1.3.117 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1+Kelch_KLHDC2_KLHL20_DRC7 0.51 41.0 3.08e-01 89.1% 75.1%
4960051 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.51 42.0 3.64e-01 90.9% 96.6%
3847094 5.1.5.102 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › OLF 0.51 43.0 3.36e-01 98.2% 77.4%
3903092 5.1.4.301 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_1, Kelch_KLHDC2_KLHL20_DRC7 0.51 43.0 3.07e-01 95.5% 37.0%
3697386 874.1.1.0 ↗ a+b duplicates or obligate multimers › Smc hinge domain › Smc hinge domain › Smc hinge domain 0.50 42.0 3.45e-01 90.9% 80.5%
3419193 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.50 43.0 3.54e-01 95.5% 58.6%
5030774 7502.1.1.0 ↗ a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS 0.50 41.0 3.56e-01 90.9% 99.4%
4991161 2.21.1.0 ↗ beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) 0.50 35.0 3.61e-01 93.6% 75.2%
3280061 2008.1.1.20 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Uma2 0.50 45.0 3.88e-01 99.1% 90.8%
D3 medium residues 153-220
PDB