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mRNA_capping_enzyme,_large_subunit

Euk-Vir

Pigeonpox_virus

mRNA_capping_enzyme,_large_subunit__YP_009046377__Pigeonpox_virus__10264

Identity

Accession:: YP_009046377 ↗
Protein ID:: mRNA_capping_enzyme,_large_subunit
Kingdom:: euk

Quality

72.8 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Pokkesviricetes› Chitovirales› Poxviridae› Avipoxvirus› Pigeonpox_virus

TaxID: 10264

Cluster

View cluster (35 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-232

PDB

Domain cluster: rep: hypothetical_protein_psal_cds_310__YP_008436986__Pandoravirus_salinus__1349410__D56-163_204-331

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF10640.15 best	MCEL_TPase	277.9	5.30e-83	90.6%	98.5%

CATH (13)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4ckbD02	3.20.100.20	Alpha Beta › Alpha-Beta Barrel › mRNA Triphosphatase Cet1; Chain A ›	0.93	84.0	8.76e-01	97.8%	100.0%
1yemB00	2.40.320.10	Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001	0.72	48.0	5.58e-01	87.4%	91.0%
3c0tA00	2.40.320.10	Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001	0.69	58.0	6.08e-01	87.0%	97.0%
2eenA00	2.40.320.10	Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001	0.68	49.0	5.43e-01	85.7%	91.0%
4pn0C00	3.20.100.10	Alpha Beta › Alpha-Beta Barrel › mRNA Triphosphatase Cet1; Chain A › mRNA triphosphatase Cet1-like	0.67	62.0	5.90e-01	97.8%	93.8%
1d8hA00	3.20.100.10	Alpha Beta › Alpha-Beta Barrel › mRNA Triphosphatase Cet1; Chain A › mRNA triphosphatase Cet1-like	0.66	62.0	5.63e-01	98.7%	85.1%
2gfgA00	2.40.320.10	Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001	0.63	48.0	5.17e-01	88.3%	91.6%
5a67A00	2.40.320.10	Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001	0.62	50.0	5.22e-01	87.0%	91.3%
1dwuA01	3.30.190.20	Alpha Beta › 2-Layer Sandwich › Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase › Ribosomal protein L1/L10, rRNA-binding domain	0.57	29.0	3.75e-01	99.6%	86.0%
3d2lA02	2.20.25.110	Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases	0.56	17.0	3.00e-01	70.4%	87.3%
3mgjA00	3.30.70.2690	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › LOR/SDH bifunctional enzyme, conserved domain	0.55	23.0	3.44e-01	78.0%	88.5%
1nxiA00	3.30.70.970	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RraB-like	0.54	29.0	3.58e-01	99.1%	82.6%
4xmeA00	2.40.128.20	Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain	0.53	34.0	3.76e-01	88.3%	76.6%

ECOD (15)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1147806	868.1.1.7 ↗	a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › MCEL_TPase	0.93	85.0	8.61e-01	99.1%	95.4%
3253396	868.1.1.2 ↗	a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA_triPase	0.70	61.0	6.37e-01	96.4%	100.0%
4021159	868.1.1.0 ↗	a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related	0.69	59.0	5.92e-01	89.7%	94.3%
3388799	868.1.1.1 ↗	a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH	0.69	50.0	5.45e-01	88.3%	88.6%
3788818	868.1.1.5 ↗	a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › Med18	0.69	58.0	5.52e-01	88.3%	95.0%
3599391	868.1.1.2 ↗	a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA_triPase	0.67	60.0	6.11e-01	97.8%	95.4%
4426203	868.1.1.2 ↗	a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA_triPase	0.67	63.0	5.96e-01	97.8%	94.1%
4063720	868.1.1.2 ↗	a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA_triPase	0.67	62.0	5.92e-01	97.8%	95.7%
1406770	868.1.1.2 ↗	a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA_triPase	0.66	61.0	5.79e-01	97.8%	93.5%
3255982	868.1.1.5 ↗	a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › Med18	0.66	53.0	5.55e-01	88.3%	92.5%
3802153	868.1.1.11 ↗	a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › DUF7903	0.65	59.0	5.79e-01	96.4%	100.0%
3698521	868.1.1.2 ↗	a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA_triPase	0.65	60.0	5.99e-01	98.2%	98.2%
3609931	868.1.1.2 ↗	a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA_triPase	0.63	58.0	5.83e-01	98.2%	96.1%
3980590	304.13.1.1 ↗	a+b two layers › Alpha-beta plaits › Hypothetical protein VC0424 › Hypothetical protein VC0424 › RraB	0.56	27.0	3.77e-01	98.7%	94.3%
5278	304.13.1.1 ↗	a+b two layers › Alpha-beta plaits › Hypothetical protein VC0424 › Hypothetical protein VC0424 › RraB	0.54	29.0	3.58e-01	99.1%	82.6%

D2 high residues 244-398

PDB

Domain cluster: rep: Salt_Pond_R1_B_H2O_MG_scaffold_1_prodigal-single.1__X__X__00295__D161-347

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF21004.4 best	MCEL_GT_NTPase	128.9	9.70e-38	64.5%	88.5%

D3 high residues 404-493

PDB

D4 medium residues 573-719_772-811_841-852

PDB

Domain cluster: rep: mRNA_capping_enzyme_large_subunit__YP_009408486__NY_014_poxvirus__2025360__D559-838

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03291.23 best	mRNA_G-N7_MeTrfase	55.5	7.20e-15	82.4%	46.0%

D5 medium residues 720-771_812-840

PDB

Domain cluster: rep: mRNA_capping_enzyme_large_subunit__YP_009408284__Murmansk_poxvirus__2025359__D708-760_793-839