←Back to structures

mRNA_capping_enzyme_large_subunit

Euk-Vir

Murmansk_poxvirus

mRNA_capping_enzyme_large_subunit__YP_009408284__Murmansk_poxvirus__2025359

Identity

Accession:: YP_009408284 ↗
Protein ID:: mRNA_capping_enzyme_large_subunit
Kingdom:: euk

Quality

87.7 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Pokkesviricetes› Chitovirales› Poxviridae› Centapoxvirus› Murmansk_poxvirus

TaxID: 2025359

Cluster

View cluster (35 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 32-225

PDB

Domain cluster: rep: large_subunit_of_mRNA_capping_enzyme__YP_232988__Vaccinia_virus__10245__D28-151_168-191

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF10640.15 best	MCEL_TPase	292.9	1.40e-87	98.5%	96.5%

D2 high residues 238-389

PDB

Domain cluster: rep: Salt_Pond_R1_B_H2O_MG_scaffold_1_prodigal-single.1__X__X__00295__D161-347

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF21004.4 best	MCEL_GT_NTPase	142.5	6.20e-42	65.1%	87.6%

D3 high residues 395-503

PDB

Domain cluster: rep: putative_D1R_protein__YP_010085774__Orthopoxvirus_Abatino__2478919__D399-522

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF21005.5 best	OB_MCEL_GT	173.9	2.80e-51	100.0%	79.7%

D4 medium residues 541-707_761-792

PDB

Domain cluster: rep: IMGVR_UViG_3300009616_000257-3300009616-Ga0116111_100275611__D486-632

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03291.23 best	mRNA_G-N7_MeTrfase	60.9	1.60e-16	88.4%	49.2%

D5 medium residues 708-760_793-839

PDB

Domain cluster: representative

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2vdwG00	3.40.50.150	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39	0.85	83.0	5.71e-01	100.0%	42.8%
3mzkB01	6.20.50.30	Special › Other non-globular › N-terminal domain of TfIIb ›	0.60	25.0	3.73e-01	75.0%	100.0%
4ii1A02	2.30.30.140	Mainly Beta › Roll › SH3 type barrels. ›	0.52	29.0	3.72e-01	92.0%	100.0%
6n90A00	3.30.2310.20	Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like	0.51	25.0	2.70e-01	83.0%	52.3%
1u0tA02	2.60.200.30	Mainly Beta › Sandwich › Tumour Suppressor Smad4 › Probable inorganic polyphosphate/atp-NAD kinase; domain 2	0.51	43.0	3.91e-01	92.0%	97.8%

ECOD (11)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1283690	2003.1.5.28 ↗	a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › mRNA_G-N7_MeTrfase	0.98	96.0	6.43e-01	100.0%	43.7%
4064452	219.1.1.18 ↗	a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39	0.59	34.0	3.02e-01	92.0%	40.7%
4023063	216.1.1.8 ↗	a+b two layers › UBC-like › UBC-like › UBC-like › Knl1_RWD_C	0.55	27.0	2.78e-01	90.0%	47.4%
4929578	331.1.1.0 ↗	a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like	0.55	29.0	2.71e-01	86.0%	41.7%
3736837	216.1.1.0 ↗	a+b two layers › UBC-like › UBC-like › UBC-like	0.54	30.0	2.98e-01	90.0%	50.5%
3474675	4291.1.1.1 ↗	beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP	0.54	42.0	2.93e-01	85.0%	67.1%
3968842	219.1.1.0 ↗	a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases	0.53	32.0	2.95e-01	90.0%	45.4%
3385461	219.1.1.18 ↗	a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39	0.53	33.0	2.93e-01	95.0%	42.8%
3682574	219.1.1.112 ↗	a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH, UCH_1	0.53	34.0	2.43e-01	87.0%	22.0%
4579331	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.51	30.0	3.62e-01	91.0%	90.5%
3222051	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.51	30.0	3.64e-01	90.0%	90.8%