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mRNA_decapping_enzyme
Euk-VirSea_otter_poxvirus
mRNA_decapping_enzyme__YP_009480623__Sea_otter_poxvirus__1416741
Identity
- Accession:
- YP_009480623 ↗
- Protein ID:
- mRNA_decapping_enzyme
- Kingdom:
- euk
Quality
90.7
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Pokkesviricetes›
Chitovirales›
Poxviridae›
Mustelpoxvirus›
Sea_otter_poxvirus
TaxID: 1416741
Cluster
View cluster (31 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-68_122-242
Domain cluster:
rep: CAKLQF020000005.1__CAH1078277.1__SAMEA5780031_01286__00128__D7-154
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00293.35 best | NUDIX | 36.7 | 5.70e-09 | 65.2% | 82.1% |
| PF08476.16 | VD10_N | 54.2 | 1.30e-14 | 18.8% | 74.4% |
D2
high
residues 71-108
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2elcA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.68 | 51.0 | 4.45e-01 | 92.1% | 62.7% |
| 5my3A00 | 1.10.555.10 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase; Chain A › Rho GTPase activation protein | 0.64 | 52.0 | 3.35e-01 | 100.0% | 43.2% |
| 2i7xA02 | 3.40.50.10890 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 46.0 | 3.04e-01 | 97.4% | 70.2% |
| 3kuqA00 | 1.10.555.10 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase; Chain A › Rho GTPase activation protein | 0.57 | 43.0 | 2.87e-01 | 94.7% | 46.4% |
| 3vzbB02 | 2.60.200.40 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.56 | 38.0 | 2.47e-01 | 73.7% | 16.8% |
| 4nqwA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 40.0 | 3.46e-01 | 94.7% | 65.6% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3267703 | 4048.1.1.1 ↗ | alpha bundles › Second alpha-helical domain in heme-dependent catalases › Second alpha-helical domain in heme-dependent catalases › Second alpha-helical domain in heme-dependent catalases › Catalase-rel | 0.68 | 53.0 | 4.14e-01 | 94.7% | 42.1% |
| 3478242 | 4030.1.1.0 ↗ | alpha bundles › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz | 0.65 | 51.0 | 4.88e-01 | 100.0% | 96.0% |
| 3301274 | 226.1.1.0 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain | 0.54 | 40.0 | 2.89e-01 | 100.0% | 28.1% |