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major_capsid_protein_L1
Euk-VirMupapillomavirus_1
major_capsid_protein_L1__NP_040309__Mupapillomavirus_1__334203
Identity
- Accession:
- NP_040309 ↗
- Protein ID:
- major_capsid_protein_L1
- Kingdom:
- euk
Quality
77.2
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Papovaviricetes›
Zurhausenvirales›
Papillomaviridae›
Mupapillomavirus›
Mupapillomavirus_1
TaxID: 334203
Cluster
View cluster (154 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 29-122_363-397_455-476
Domain cluster:
rep: L1_capsid_protein__YP_009272579__Bos_taurus_papillomavirus_13__1887213__D32-107_305-401_440-463
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 160.5 | 9.90e-47 | 64.2% | 19.3% |
| PF00500.25 | Late_protein_L1 | 44.4 | 1.50e-11 | 25.2% | 7.2% |
D2
medium
residues 148-161_268-315
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 43.8 | 2.30e-11 | 100.0% | 11.5% |
D3
medium
residues 162-177_189-246
Domain cluster:
rep: L1__YP_009552560__Gammapapillomavirus_sp.__2049444__D159-250
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 109.4 | 2.90e-31 | 100.0% | 17.3% |