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major_capsid_protein_L1
Euk-VirHuman_papillomavirus_121
major_capsid_protein_L1__YP_003668031__Human_papillomavirus_121__915429
Identity
- Accession:
- YP_003668031 ↗
- Protein ID:
- major_capsid_protein_L1
- Kingdom:
- euk
Quality
84.0
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Papovaviricetes›
Zurhausenvirales›
Papillomaviridae›
Gammapapillomavirus›
Human_papillomavirus_121
TaxID: 915429
Cluster
View cluster (154 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 29-141_154-176_318-418_457-487
Domain cluster:
rep: L1_capsid_protein__YP_009272579__Bos_taurus_papillomavirus_13__1887213__D32-107_305-401_440-463
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 200.6 | 6.50e-59 | 51.1% | 29.8% |
| PF00500.25 | Late_protein_L1 | 138.7 | 3.80e-40 | 38.8% | 19.7% |
| PF00500.25 | Late_protein_L1 | 34.2 | 1.80e-08 | 11.9% | 6.0% |
D2
medium
residues 142-153_177-268_291-317
Domain cluster:
rep: late_protein_L1__NP_077122__Alphapapillomavirus_4__337043__D129-185_198-277_298-367
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 159.0 | 2.70e-46 | 96.2% | 26.8% |