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major_capsid_protein_VP1
Euk-VirMW_polyomavirus
major_capsid_protein_VP1__YP_006495788__MW_polyomavirus__1203539
Identity
- Accession:
- YP_006495788 ↗
- Protein ID:
- major_capsid_protein_VP1
- Kingdom:
- euk
Quality
74.2
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Papovaviricetes›
Sepolyvirales›
Polyomaviridae›
Deltapolyomavirus›
MW_polyomavirus
TaxID: 1203539
Cluster
View cluster (117 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 69-160_252-333
Domain cluster:
rep: VP1__YP_009325930__Betapolyomavirus_securanorvegicus__1919247__D30-309
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00718.29 best | Polyoma_coat | 113.8 | 1.20e-32 | 52.9% | 31.8% |
| PF00718.29 | Polyoma_coat | 137.5 | 7.10e-40 | 49.4% | 28.4% |
D2
medium
residues 161-251
Domain cluster:
rep: VP1_structural_protein__YP_009174991__bat_polyomavirus_4b__2758138__D169-242
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00718.29 best | Polyoma_coat | 110.5 | 1.10e-31 | 100.0% | 29.7% |