major_capsid_protein

Euk-Vir

Meleagrid_alphaherpesvirus_1

major_capsid_protein__NP_073312__Meleagrid_alphaherpesvirus_1__37108

Identity

74.6 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Mardivirus› Meleagrid_alphaherpesvirus_1

TaxID: 37108

View cluster (34 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 486-539_557-595

PDB

Domain cluster: rep: major_capsid_protein__YP_009046515__Falconid_herpesvirus_1__1510155__D483-586

D2 medium residues 252-338_371-410_1122-1136

PDB

Domain cluster: rep: ORF25__YP_001129378__Human_gammaherpesvirus_8__37296__D226-302_366-395

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03122.21 best	Herpes_MCP	100.2	1.10e-28	68.3%	6.9%
PF03122.21	Herpes_MCP	30.4	1.30e-07	35.9%	2.7%

D3 medium residues 411-434_1063-1073_1137-1150_1197-1227_1331-1391

PDB

Domain cluster: representative

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03122.21 best	Herpes_MCP	67.6	7.80e-19	43.3%	4.4%
PF03122.21	Herpes_MCP	49.6	2.00e-13	31.9%	2.9%

D4 medium residues 1228-1313

PDB

Domain cluster: rep: major_capsid_protein__YP_001033947__Gallid_alphaherpesvirus_2__10390__D1253-1322

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03122.21 best	Herpes_MCP	115.6	2.40e-33	100.0%	5.9%