major_capsid_protein

Euk-Vir

Human_papillomavirus_135

major_capsid_protein__YP_006393287__Human_papillomavirus_135__1070408

Identity

83.3 mean pLDDT

Shotokuvirae› Cossaviricota› Papovaviricetes› Zurhausenvirales› Papillomaviridae› Gammapapillomavirus› Human_papillomavirus_135

TaxID: 1070408

View cluster (154 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 22-65_88-111_378-418_454-485

PDB

Domain cluster: rep: unnamed_protein_product__YP_004895386__Canis_familiaris_papillomavirus_10__1087109__D20-62_366-406_443-470

Pfam (3)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00500.25 best	Late_protein_L1	43.3	3.20e-11	31.9%	8.2%
PF00500.25	Late_protein_L1	49.4	4.60e-13	31.9%	8.2%
PF00500.25	Late_protein_L1	30.2	3.10e-07	25.5%	6.4%

D2 medium residues 66-87_144-175_236-255_308-344

PDB

Domain cluster: rep: L1__YP_009508760__Peromyscus_papillomavirus_1__1074206__D104-118_156-168_236-258_310-344

Pfam (3)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00500.25 best	Late_protein_L1	59.9	3.00e-16	35.1%	7.4%
PF00500.25	Late_protein_L1	41.0	1.60e-10	33.3%	6.6%
PF00500.25	Late_protein_L1	28.8	7.90e-07	22.5%	4.8%

D3 medium residues 112-143_176-235_256-270_290-307

PDB

Domain cluster: rep: L1_protein__YP_006470639__Phocoena_phocoena_papillomavirus_4__706527__D121-153_165-238_287-306

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00500.25 best	Late_protein_L1	79.8	2.80e-22	61.6%	13.3%