major_capsid_protein

Euk-Vir

Human_papillomavirus_136

major_capsid_protein__YP_006393294__Human_papillomavirus_136__1070409

Identity

82.6 mean pLDDT

Shotokuvirae› Cossaviricota› Papovaviricetes› Zurhausenvirales› Papillomaviridae› Gammapapillomavirus› Human_papillomavirus_136

TaxID: 1070409

View cluster (154 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 118-241_253-307

PDB

Domain cluster: rep: late_protein_L1__NP_077122__Alphapapillomavirus_4__337043__D129-185_198-277_298-367

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00500.25 best	Late_protein_L1	179.1	2.20e-52	100.0%	36.2%

D2 medium residues 12-70

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00500.25 best	Late_protein_L1	85.1	6.70e-24	100.0%	11.7%

D3 medium residues 71-112_242-252_311-423_457-489

PDB

Domain cluster: rep: L1_capsid_protein__YP_009272579__Bos_taurus_papillomavirus_13__1887213__D32-107_305-401_440-463

Pfam (3)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00500.25 best	Late_protein_L1	156.5	1.60e-45	61.3%	22.7%
PF00500.25	Late_protein_L1	61.9	7.70e-17	25.1%	9.0%
PF00500.25	Late_protein_L1	34.6	1.40e-08	17.6%	6.4%