←Back to structures

major_capsid_protein

Euk-Vir

Dragonfly-associated_microphage_1_Viruses.

major_capsid_protein__YP_006908226__Dragonfly-associated_microphage_1_Viruses.__X

Identity

Accession:
YP_006908226 ↗
Protein ID:
major_capsid_protein
Kingdom:
euk

Quality

71.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 362-445
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02305.23 best Phage_F 63.5 2.40e-17 100.0% 17.8%
D2 medium residues 1-84_155-170_292-352_461-477
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02305.23 best Phage_F 77.8 1.10e-21 51.7% 16.2%
CATH (60)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1cd3F00 2.60.169.10 Mainly Beta › Sandwich › Bacteriophage G4 Capsid Proteins Gpf, Gpg, Gpj, subunit 1 › Microviridae F protein 0.88 85.0 6.13e-01 100.0% 96.9%
3afgA03 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.76 43.0 5.58e-01 94.9% 97.1%
1yllA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.75 35.0 4.88e-01 99.4% 88.0%
1pm4A00 2.60.120.510 Mainly Beta › Sandwich › Jelly Rolls › Mitogen Ypm 0.74 43.0 5.30e-01 94.4% 88.0%
4indA02 2.60.120.1310 Mainly Beta › Sandwich › Jelly Rolls › 0.73 45.0 5.61e-01 95.5% 98.2%
3isrA02 2.60.40.2250 Mainly Beta › Sandwich › Immunoglobulin-like › 0.72 33.0 4.37e-01 96.1% 78.0%
2wq4A01 2.60.120.760 Mainly Beta › Sandwich › Jelly Rolls › 0.71 50.0 5.80e-01 96.1% 99.2%
4d6gA03 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.69 32.0 3.71e-01 97.2% 58.5%
5ikuA01 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.69 38.0 4.89e-01 94.4% 92.3%
2df7A02 2.60.120.660 Mainly Beta › Sandwich › Jelly Rolls › icosahedral virus 0.68 52.0 5.81e-01 97.8% 100.0%
3ideA02 2.60.120.660 Mainly Beta › Sandwich › Jelly Rolls › icosahedral virus 0.68 53.0 5.86e-01 97.8% 100.0%
4indA03 2.60.120.1330 Mainly Beta › Sandwich › Jelly Rolls › 0.67 43.0 5.12e-01 97.8% 95.8%
1sefA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.66 33.0 3.78e-01 98.9% 62.6%
2qfeA00 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.64 43.0 4.85e-01 97.8% 87.8%
4lejA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.64 34.0 3.56e-01 99.4% 54.4%
1gqgC01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.63 32.0 3.55e-01 98.9% 59.3%
2pn5A08 2.60.120.1540 Mainly Beta › Sandwich › Jelly Rolls › 0.63 38.0 4.67e-01 100.0% 95.5%
1yi9A02 2.60.120.230 Mainly Beta › Sandwich › Jelly Rolls › 0.63 39.0 4.43e-01 97.2% 81.0%
4qmaA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.63 35.0 3.92e-01 98.9% 67.8%
2b39A10 2.60.120.1540 Mainly Beta › Sandwich › Jelly Rolls › 0.62 40.0 4.83e-01 100.0% 100.0%
4jdmA03 2.60.120.1340 Mainly Beta › Sandwich › Jelly Rolls › 0.61 49.0 5.25e-01 98.3% 95.5%
6mkbA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.61 52.0 5.48e-01 98.3% 100.0%
2id4A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.60 44.0 4.96e-01 100.0% 97.1%
1hx6A02 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.60 44.0 4.91e-01 100.0% 94.3%
2bpa200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.60 43.0 4.36e-01 93.3% 74.3%
4bcuA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.59 55.0 5.41e-01 98.9% 93.6%
4j25F00 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.59 33.0 3.33e-01 97.8% 51.3%
2xdvA01 2.60.120.650 Mainly Beta › Sandwich › Jelly Rolls › Cupin 0.59 35.0 3.43e-01 100.0% 52.8%
2y7lA02 2.60.40.2430 Mainly Beta › Sandwich › Immunoglobulin-like › Agglutinin-like protein, N-terminal domain, N2 subdomain 0.58 39.0 4.21e-01 94.9% 78.8%
1e5rB01 2.60.120.330 Mainly Beta › Sandwich › Jelly Rolls › B-lactam Antibiotic, Isopenicillin N Synthase; Chain 0.58 30.0 3.10e-01 96.6% 48.6%
1nxmA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.58 32.0 3.18e-01 98.3% 48.5%
2w5fB01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 46.0 4.94e-01 96.6% 98.0%
4xuoA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.56 47.0 5.01e-01 97.2% 100.0%
5ewnA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.56 52.0 5.16e-01 98.3% 96.7%
2xbzA00 2.60.40.2380 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 38.0 4.41e-01 94.4% 96.2%
1opoC01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.55 47.0 4.84e-01 100.0% 98.2%
2ws9201 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.54 50.0 4.90e-01 99.4% 91.3%
1i5pA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.54 41.0 4.31e-01 96.1% 87.3%
3nsjA02 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.54 38.0 4.40e-01 83.7% 98.4%
2c9kA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.54 42.0 4.42e-01 95.5% 89.0%
1oh4A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.54 48.0 4.88e-01 96.6% 96.0%
1ohfA02 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.53 49.0 4.12e-01 100.0% 91.9%
5j98B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.53 49.0 4.32e-01 100.0% 78.1%
4qawH03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.53 38.0 4.29e-01 96.1% 97.8%
3jzyA00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.53 36.0 4.31e-01 81.5% 100.0%
3iiiA03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.53 48.0 4.80e-01 96.6% 98.9%
1ng0C00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.52 48.0 4.53e-01 100.0% 88.1%
1w99A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 44.0 4.30e-01 94.9% 83.2%
7a1rA01 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.52 34.0 4.14e-01 80.3% 100.0%
2xzmJ00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.52 31.0 3.88e-01 79.8% 100.0%
1ihmB01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.52 46.0 4.27e-01 100.0% 76.8%
4xabA00 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.51 38.0 3.38e-01 98.9% 54.3%
2y26A02 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.51 42.0 4.38e-01 97.8% 93.8%
1f8vC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.51 46.0 3.88e-01 99.4% 77.8%
4hvzA02 3.30.70.2970 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Protein of unknown function (DUF541), domain 2 0.51 32.0 3.85e-01 95.5% 99.1%
5t5lA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 46.0 4.20e-01 97.8% 99.6%
4qpiB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.51 47.0 4.37e-01 99.4% 91.2%
1novA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.50 46.0 3.82e-01 99.4% 77.0%
7pjjA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.50 35.0 3.98e-01 91.6% 96.9%
1cx1A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.50 39.0 4.15e-01 96.6% 94.1%
ECOD (79)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1191 10.2.1.26 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Phage_F 0.88 85.0 6.13e-01 100.0% 96.5%
4990610 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.79 44.0 5.86e-01 95.5% 100.0%
5064648 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.77 44.0 5.78e-01 96.1% 100.0%
4934399 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.77 46.0 5.51e-01 95.5% 87.5%
5060962 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.77 45.0 5.84e-01 96.1% 100.0%
5062230 10.1.2.183 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PPC 0.75 41.0 5.23e-01 94.4% 90.5%
5026423 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.75 43.0 5.52e-01 94.4% 96.2%
5038652 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.75 44.0 5.58e-01 94.4% 98.1%
3342352 10.32.1.210 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GOLD_PATL1_C 0.74 44.0 5.52e-01 95.5% 95.5%
3591145 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.73 45.0 5.63e-01 98.9% 99.1%
5046630 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.73 43.0 5.28e-01 98.3% 90.4%
4557440 10.32.1.4 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.72 42.0 5.39e-01 97.8% 97.1%
5070101 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.72 40.0 4.84e-01 94.4% 80.8%
3300834 10.32.1.210 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GOLD_PATL1_C 0.72 44.0 5.40e-01 96.6% 93.9%
5053826 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.71 44.0 5.55e-01 98.3% 100.0%
3199160 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.71 43.0 5.42e-01 97.2% 100.0%
3862309 10.32.1.4 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.71 42.0 4.20e-01 97.8% 56.7%
4978088 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.71 42.0 5.19e-01 95.5% 92.2%
4935032 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.70 43.0 5.38e-01 97.2% 98.2%
5044223 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.69 40.0 5.11e-01 86.0% 100.0%
4944602 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.68 46.0 4.94e-01 96.6% 80.7%
5042684 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.67 41.0 4.93e-01 96.6% 90.0%
5020631 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.67 43.0 4.51e-01 99.4% 70.6%
5039150 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.67 43.0 5.22e-01 97.8% 99.1%
4172901 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.66 43.0 5.18e-01 97.8% 100.0%
4960627 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.66 41.0 4.96e-01 96.6% 94.8%
3214241 10.4.1.9 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB_2 0.66 36.0 4.56e-01 95.5% 89.5%
3606027 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.65 46.0 5.08e-01 95.5% 88.3%
3396112 10.32.1.235 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › MBF2 0.64 34.0 4.37e-01 96.6% 89.0%
3259568 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.64 44.0 5.22e-01 96.1% 100.0%
3597812 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.64 46.0 5.29e-01 96.6% 100.0%
3597600 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.64 45.0 5.06e-01 96.1% 94.1%
3591997 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.63 41.0 4.71e-01 97.8% 89.2%
5038393 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.62 43.0 4.87e-01 97.2% 91.9%
5046664 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.62 41.0 4.94e-01 96.1% 100.0%
5033161 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.61 44.0 5.06e-01 97.2% 100.0%
3822933 207.1.1.43 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_3 0.61 42.0 3.01e-01 94.4% 23.8%
3519566 10.32.1.230 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › NDNF_N 0.61 43.0 4.89e-01 94.4% 94.8%
4291120 10.21.1.1 ↗ beta sandwiches › jelly-roll › Jelly-roll domain in ADAMTS13 › Jelly-roll domain in ADAMTS13 › ADAMTS_spacer1 0.61 43.0 4.88e-01 98.9% 94.8%
3294967 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.61 42.0 4.28e-01 92.7% 72.4%
5040872 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.60 40.0 4.72e-01 95.5% 99.2%
3611465 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.60 44.0 4.92e-01 96.1% 95.0%
3272798 10.32.1.3 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Calpain_III 0.60 44.0 5.00e-01 95.5% 99.3%
3978758 10.4.1.42 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › Ig_GpJ_C 0.60 43.0 4.91e-01 96.1% 100.0%
3620151 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.60 38.0 4.51e-01 92.1% 96.5%
3619733 10.4.1.0 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.59 40.0 4.50e-01 94.4% 89.6%
3598703 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.59 43.0 4.71e-01 98.9% 91.0%
3869890 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.59 44.0 4.67e-01 95.5% 87.1%
3269174 10.32.1.189 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CAND6-7_N 0.59 43.0 4.87e-01 92.1% 99.3%
5018271 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.58 40.0 4.69e-01 87.1% 100.0%
3733487 10.12.1.53 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_3 0.58 35.0 3.31e-01 99.4% 49.5%
3405712 10.32.1.194 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › APD1-4_N 0.57 47.0 5.07e-01 94.9% 100.0%
3758531 10.32.1.189 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CAND6-7_N 0.57 48.0 5.10e-01 94.4% 99.4%
5057560 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.56 39.0 4.31e-01 96.1% 87.6%
4615128 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.56 44.0 4.75e-01 97.2% 96.7%
3867662 10.1.1.69 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › CAND6-7_N 0.55 48.0 5.03e-01 94.9% 99.4%
3609738 10.3.1.0 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like 0.55 49.0 4.76e-01 94.9% 98.5%
3479980 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 37.0 4.17e-01 93.3% 88.6%
3546323 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.55 49.0 5.00e-01 96.1% 97.7%
5031166 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.55 49.0 5.03e-01 96.6% 100.0%
4314167 10.32.1.18 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Endotoxin_C 0.54 41.0 4.28e-01 97.2% 84.7%
3906025 10.32.1.189 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CAND6-7_N 0.54 48.0 4.97e-01 94.4% 100.0%
3464595 10.32.1.189 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CAND6-7_N 0.54 43.0 4.70e-01 96.6% 100.0%
None — 0.54 33.0 3.14e-01 100.0% 50.7%
3576602 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.54 45.0 4.70e-01 94.9% 96.2%
5027268 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.54 41.0 4.41e-01 94.4% 91.6%
3492889 11.2.1.19 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › DUF3657 0.54 43.0 3.54e-01 83.7% 63.5%
3769357 10.1.1.69 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › CAND6-7_N 0.53 47.0 4.78e-01 93.3% 100.0%
3544039 11.2.1.19 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › DUF3657 0.53 43.0 3.41e-01 83.7% 65.7%
3543120 10.32.1.216 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › MAM 0.53 45.0 4.73e-01 97.8% 99.4%
5083911 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.53 48.0 4.82e-01 95.5% 100.0%
3258185 10.12.1.0 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.53 34.0 3.16e-01 98.9% 48.5%
3888291 11.2.1.19 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › DUF3657 0.53 42.0 3.60e-01 83.7% 67.9%
3581843 10.1.1.10 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM 0.52 44.0 4.59e-01 97.2% 96.4%
5029611 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.52 46.0 4.63e-01 95.5% 100.0%
157233 10.32.1.18 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Endotoxin_C 0.52 44.0 4.48e-01 94.9% 93.0%
3717531 10.1.1.19 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_leg-like 0.52 46.0 3.84e-01 96.6% 97.7%
2710690 10.2.1.29 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Circo_capsid 0.52 48.0 4.62e-01 100.0% 92.0%
3282039 10.2.1.96 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › PF28588 0.51 45.0 4.59e-01 98.3% 95.3%
D3 medium residues 85-154
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02305.23 best Phage_F 32.2 7.20e-08 91.4% 9.6%
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2blfB01 1.10.760.10 Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain 0.59 37.0 3.91e-01 75.7% 69.8%
7x3hA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.53 38.0 3.29e-01 77.1% 82.8%
2k3pA01 1.10.10.1350 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Spidroin domain, C-terminal domain 0.53 38.0 3.29e-01 78.6% 85.3%
1ynjJ01 1.10.1790.20 Mainly Alpha › Orthogonal Bundle › PTS-regulatory domain, PRD › 0.50 36.0 3.07e-01 75.7% 86.2%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3614620 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.53 39.0 2.72e-01 80.0% 43.1%
3515315 865.1.1.0 ↗ beta complex topology › PheT/TilS domain › PheT/TilS domain › PheT/TilS domain 0.51 39.0 2.72e-01 82.9% 98.8%
4136882 601.7.1.59 ↗ alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › YaaC 0.50 39.0 2.83e-01 87.1% 98.7%
D4 medium residues 237-291
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02305.23 best Phage_F 50.7 1.80e-13 100.0% 11.2%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3653276 244.3.1.3 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › CO_deh_flav_C 0.58 45.0 3.42e-01 85.5% 62.2%